RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CLCN5P51795 746 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 CASP6P55212 293 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 ROR2Q01974 943 aaKnown RBP6.38□□□□□ -1.39
PTPN12-213ENST00000519553 TAF11Q15544 211 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 OTUD1Q5VV17 481 aaPredicted RBP6.38□□□□□ -1.39
PTPN12-213ENST00000519553 TXNDC8Q6A555 127 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 RRM2BQ7LG56 351 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 LURAP1LQ8IV03 231 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 KIAA2013Q8IYS2 634 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 PRR26Q8N8Z3 221 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 KLHL29Q96CT2 875 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 KIF1BPQ96EK5 621 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 GFM1Q96RP9 751 aaKnown RBP6.38□□□□□ -1.39
PTPN12-213ENST00000519553 SLC26A6Q9BXS9 759 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 NUF2Q9BZD4 464 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 MRPL44Q9H9J2 332 aaKnown RBP6.38□□□□□ -1.39
PTPN12-213ENST00000519553 CLK4Q9HAZ1 481 aaKnown RBP6.38□□□□□ -1.39
PTPN12-213ENST00000519553 VEZTQ9HBM0 779 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 SRPRBQ9Y5M8 271 aaKnown RBP6.38□□□□□ -1.39
PTPN12-213ENST00000519553 PTGDR2Q9Y5Y4 395 aa6.38□□□□□ -1.39
PTPN12-213ENST00000519553 KLRF2D3W0D1 207 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 TAF4O00268 1085 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 CHL1O00533 1208 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 LIASO43766 372 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 ELF1P32519 619 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 ABCD1P33897 745 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 POLGP54098 1239 aaPredicted RBP6.37□□□□□ -1.39
PTPN12-213ENST00000519553 ABATP80404 500 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 RUNX2Q13950 521 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 MYBPC2Q14324 1141 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 ESCO2Q56NI9 601 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 DNTTIP2Q5QJE6 756 aaKnown RBP6.37□□□□□ -1.39
PTPN12-213ENST00000519553 FNBP1LQ5T0N5 605 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 NEXN-AS1Q8NBZ9 246 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 OIT3Q8WWZ8 545 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 SNAPC3Q92966 411 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 CAMK2AQ9UQM7 478 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 A3GALT2U3KPV4 340 aa6.37□□□□□ -1.39
PTPN12-213ENST00000519553 KLK8O60259 260 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 ATP2C2O75185 946 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 ITGAXP20702 1163 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 MYF6P23409 242 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 HOXA11P31270 313 aaPredicted RBP6.36□□□□□ -1.39
PTPN12-213ENST00000519553 ADORA2A-AS1P86434 159 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 Q0VFX4 171 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 RNPS1Q15287 305 aaKnown RBP6.36□□□□□ -1.39
PTPN12-213ENST00000519553 PRAMEF19Q5SWL8 479 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 LRRC8EQ6NSJ5 796 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 MON1BQ7L1V2 547 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 NOXA1Q86UR1 476 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 PALB2Q86YC2 1186 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 SFTPA2Q8IWL1 248 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 PAF1Q8N7H5 531 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 GJC3Q8NFK1 279 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 RFFLQ8WZ73 363 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 DCLK3Q9C098 648 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 UNC45AQ9H3U1 944 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 FZD10Q9ULW2 581 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 CARD8Q9Y2G2 431 aa6.36□□□□□ -1.39
PTPN12-213ENST00000519553 TYW5A2RUC4 315 aaKnown RBP6.35□□□□□ -1.39
PTPN12-213ENST00000519553 VWA5AO00534 786 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 TBX18O95935 607 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 CD4P01730 458 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 ARL1P40616 181 aaPredicted RBP6.35□□□□□ -1.39
PTPN12-213ENST00000519553 HARS2P49590 506 aaKnown RBP6.35□□□□□ -1.39
PTPN12-213ENST00000519553 KRTAP10-11P60412 298 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 GRIK3Q13003 919 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 CTTNQ14247 550 aaKnown RBP6.35□□□□□ -1.39
PTPN12-213ENST00000519553 SHBQ15464 509 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 DHX40Q8IX18 779 aaKnown RBP6.35□□□□□ -1.39
PTPN12-213ENST00000519553 MB21D2Q8IYB1 491 aaPredicted RBP6.35□□□□□ -1.39
PTPN12-213ENST00000519553 MIGA1Q8NAN2 632 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 B4GALNT2Q8NHY0 566 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 ADAMTS14Q8WXS8 1223 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 MPP4Q96JB8 637 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 MXRA8Q9BRK3 442 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 EBF3Q9H4W6 596 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 PLK2Q9NYY3 685 aa6.35□□□□□ -1.39
PTPN12-213ENST00000519553 OR6C75A6NL08 312 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 KDM4EB2RXH2 506 aaPredicted RBP6.34□□□□□ -1.39
PTPN12-213ENST00000519553 B4E171 279 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 NPIPB11E5RHQ5 1161 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 TFPIP10646 304 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 PCNAP12004 261 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 KRT9P35527 623 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 TSPAN7P41732 249 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 HTR6P50406 440 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 VEPH1Q14D04 833 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 SOWAHAQ2M3V2 549 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 FSCBQ5H9T9 825 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 CES5AQ6NT32 575 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 R3HCC1LQ7Z5L2 792 aaKnown RBP6.34□□□□□ -1.39
PTPN12-213ENST00000519553 PARP16Q8N5Y8 322 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 MIB2Q96AX9 1013 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 ZC3HAV1LQ96H79 300 aaKnown RBP6.34□□□□□ -1.39
PTPN12-213ENST00000519553 SF3B5Q9BWJ5 86 aaKnown RBP6.34□□□□□ -1.39
PTPN12-213ENST00000519553 BRF2Q9HAW0 419 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 PCDHA7Q9UN72 937 aa6.34□□□□□ -1.39
PTPN12-213ENST00000519553 TIMM23O14925 209 aa6.33□□□□□ -1.4
PTPN12-213ENST00000519553 TGFB1I1O43294 461 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms