RNA–Protein interactions for RNA: ENST00000519028.1

TNFRSF10B-204, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 2

Gene TNFRSF10B, Length 612 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-204ENST00000519028 SERPINF2P08697 491 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 CCNB1P14635 433 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 GNSP15586 552 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TIMP2P16035 220 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 NR2C2P49116 596 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 RWDD2BP57060 319 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PPIDQ08752 370 aaKnown RBP20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PPP2R5EQ16537 467 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 RABEPKQ7Z6M1 372 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TTC7BQ86TV6 843 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TRIM69Q86WT6 500 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 CCDC50Q8IVM0 306 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 CCDC13Q8IYE1 715 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 BBS5Q8N3I7 341 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PDLIM2Q96JY6 352 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ZNF830Q96NB3 372 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 NUDCD1Q96RS6 583 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 CAPN10Q9HC96 672 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 SUSD2Q9UGT4 822 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TPX2Q9ULW0 747 aaKnown RBP20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 SLC6A14Q9UN76 642 aa20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PACSIN2Q9UNF0 486 aaPredicted RBP20.67■□□□□ 0.9
TNFRSF10B-204ENST00000519028 DOCK9Q9BZ29 2069 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 A0A1B0GTW7 788 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TSPAN11A1L157 253 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TRAFD1O14545 582 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 BCAT2O15382 392 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 DDX3YO15523 660 aaKnown RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 AP1G1O43747 822 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 GDF9O60383 454 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 RNGTTO60942 597 aaKnown RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PYGMP11217 842 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TGM2P21980 687 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ABL2P42684 1182 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 MAXP61244 160 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 AP1S1P61966 158 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PDK1Q15118 436 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ZCCHC9Q8N567 271 aaKnown RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 C12orf50Q8NA57 414 aaPredicted RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 RAB7BQ96AH8 199 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 HERPUD2Q9BSE4 406 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 HEMGNQ9BXL5 484 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 NUSAP1Q9BXS6 441 aaKnown RBP20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ATP13A3Q9H7F0 1226 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 NT5MQ9NPB1 228 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 RBM22Q9NW64 420 aaKnown RBP eCLIP20.66■□□□□ 0.98e-8■■■■□ 20.8
TNFRSF10B-204ENST00000519028 EFR3BQ9Y2G0 817 aa20.66■□□□□ 0.9
TNFRSF10B-204ENST00000519028 LNP1A1A4G5 178 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 MIF4GDA9UHW6 222 aaKnown RBP20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 AREL1O15033 823 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 SPINT1O43278 529 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 CFIP05156 583 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PECAM1P16284 738 aaPredicted RBP20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 MAT2AP31153 395 aaKnown RBP20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 MAPK8P45983 427 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 BCL2L1Q07817 233 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 GSE1Q14687 1217 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 BBS12Q6ZW61 710 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 BZW1Q7L1Q6 419 aaKnown RBP20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ECHDC3Q96DC8 303 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 HES6Q96HZ4 224 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 BRD8Q9H0E9 1235 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 NOD2Q9HC29 1040 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 TM9SF3Q9HD45 589 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 LZTFL1Q9NQ48 299 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 AMACRQ9UHK6 382 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ZFR2Q9UPR6 939 aaKnown RBP20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 PPP2R2CQ9Y2T4 447 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 ANKRD36A6QL64 1941 aa20.65■□□□□ 0.9
TNFRSF10B-204ENST00000519028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 A0A1W2PQU0 124 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 PRR5-ARHGAP8B1AHC4 643 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 KCNK1O00180 336 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 PCDH8O95206 1070 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 ITIH2P19823 946 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 SERPINA4P29622 427 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 PTPN7P35236 360 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 LMNB2Q03252 620 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 AP1B1Q10567 949 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 UGP2Q16851 508 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 ZNF284Q2VY69 593 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 AASDHQ4L235 1098 aaPredicted RBP20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 RALGPS1Q5JS13 557 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 ALG1LQ6GMV1 187 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 AADACL2Q6P093 401 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 BRAT1Q6PJG6 821 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 B4GALNT4Q76KP1 1039 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 PRPF39Q86UA1 669 aaKnown RBP20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 HORMAD1Q86X24 394 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 ZSWIM9Q86XI8 627 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 UBL4BQ8N7F7 174 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 FEM1CQ96JP0 617 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 IL12RB2Q99665 862 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 SCUBE2Q9NQ36 999 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 FSCN3Q9NQT6 498 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 GGT7Q9UJ14 662 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 ATP8A1Q9Y2Q0 1164 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 PCDHGC4Q9Y5F7 938 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 PLXNA2O75051 1894 aa20.64■□□□□ 0.89
TNFRSF10B-204ENST00000519028 WNT9AO14904 365 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms