RNA–Protein interactions for RNA: ENST00000518910.5

CTNNA1-211, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-211ENST00000518910 CTPS1P17812 591 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 TGM2P21980 687 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 ITGB7P26010 798 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 VASPP50552 380 aaPredicted RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 NEK3P51956 506 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 TAS2R38P59533 333 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 EIF3EP60228 445 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 BCL2L1Q07817 233 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 ZNF805Q5CZA5 627 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 SEL1L3Q68CR1 1132 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 KIAA0895LQ68EN5 471 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 TIGD7Q6NT04 549 aaPredicted RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 DARS2Q6PI48 645 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 BBS12Q6ZW61 710 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 TTC7BQ86TV6 843 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 TMIEQ8NEW7 156 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 OR2I1PQ8NGU4 316 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 ACTL9Q8TC94 416 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 TFB1MQ8WVM0 346 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 CASKIN2Q8WXE0 1202 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 BIRC7Q96CA5 298 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 HDAC11Q96DB2 347 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 HES6Q96HZ4 224 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 PPP1R16AQ96I34 528 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 BRD8Q9H0E9 1235 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 ATP13A3Q9H7F0 1226 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 PARD6AQ9NPB6 346 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 AASDHPPTQ9NRN7 309 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 SMARCAL1Q9NZC9 954 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 UBP1Q9NZI7 540 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 R3HDM2Q9Y2K5 976 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 COQ6Q9Y2Z9 468 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 DMDP11532 3685 aa12.39□□□□□ -0.43
CTNNA1-211ENST00000518910 WDR87Q6ZQQ6 2873 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 A0A1W2PQU0 124 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 LRRC72A6NJI9 287 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 CEP104O60308 925 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 EPN2O95208 641 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 CCNCP24863 283 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 SERPINA4P29622 427 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 CD86P42081 329 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 MAPK8P45983 427 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 RENBPP51606 427 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 FAM193AP78312 1265 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 ZBTB16Q05516 673 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 PPIDQ08752 370 aaKnown RBP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 NIPAL4Q0D2K0 466 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 TRAF2Q12933 501 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 RFTN1Q14699 578 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 PPP2R5EQ16537 467 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 TAZQ16635 292 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 SYCP2LQ5T4T6 812 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 MEI1Q5TIA1 1274 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 USP30Q70CQ3 517 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 METTL3Q86U44 580 aaKnown RBP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 OR2T34Q8NGX1 318 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 C1orf54Q8WWF1 131 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 RUBCNQ92622 972 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 CALR3Q96L12 384 aaKnown RBP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 SLC6A18Q96N87 628 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 ZNF599Q96NL3 588 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 OLFM3Q96PB7 478 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 PSKH2Q96QS6 385 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 RBM15Q96T37 977 aaKnown RBP eCLIP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 GTPBP2Q9BX10 602 aaKnown RBP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 SUV39H2Q9H5I1 410 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 SGK2Q9HBY8 427 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 KLHL8Q9P2G9 620 aaPredicted RBP12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 CACNA1EQ15878 2313 aa12.38□□□□□ -0.43
CTNNA1-211ENST00000518910 ASCC3Q8N3C0 2202 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 BCLAF3A2AJT9 711 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 ZNF487B1APH4 448 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 WNT9AO14904 365 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 KCNN4O15554 427 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 PLRG1O43660 514 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 MMP20O60882 483 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 TJP3O95049 919 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 CPP00450 1065 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 ATP1A1P05023 1023 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 RETP07949 1114 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 TIMP2P16035 220 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 KCNA4P22459 653 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 RBL1P28749 1068 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 TERF1P54274 439 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 COPS2P61201 443 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 SFSWAPQ12872 951 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 GALNT3Q14435 633 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 NOMO1Q15155 1222 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 AASDHQ4L235 1098 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 C11orf74Q86VG3 221 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 C12orf50Q8NA57 414 aaPredicted RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 LPCAT1Q8NF37 534 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 TRIM58Q8NG06 486 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 SPATA22Q8NHS9 363 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 ZC3H10Q96K80 434 aaKnown RBP12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 QKIQ96PU8 341 aaKnown RBP eCLIP12.37□□□□□ -0.434e-9■■■■■ 42.6
CTNNA1-211ENST00000518910 NUDCD1Q96RS6 583 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 MGME1Q9BQP7 344 aa12.37□□□□□ -0.43
CTNNA1-211ENST00000518910 OSBPL1AQ9BXW6 950 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms