RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 THG1LQ9NWX6 298 aaKnown RBP15.21■□□□□ 0.03
TRAPPC9-205ENST00000518839 GGA2Q9UJY4 613 aa15.21■□□□□ 0.03
TRAPPC9-205ENST00000518839 RIMKLBQ9ULI2 386 aa15.21■□□□□ 0.03
TRAPPC9-205ENST00000518839 ACTL7AQ9Y615 435 aa15.21■□□□□ 0.03
TRAPPC9-205ENST00000518839 CEP290O15078 2479 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 SRRM3A6NNA2 597 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 PRPF4O43172 522 aaKnown RBP eCLIP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 HOXC11O43248 304 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 SHOX2O60902 331 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 IGSF6O95976 241 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 NMBRP28336 390 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 HLA-FP30511 346 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 GP5P40197 560 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 CHRNA4P43681 627 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 RGRP47804 291 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 ILF2Q12905 390 aaKnown RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 ADAM15Q13444 863 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 SEPT6Q14141 434 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 PDGFRLQ15198 375 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 DHCR24Q15392 516 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 TERF2Q15554 542 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 FAM78AQ5JUQ0 283 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 GRTP1Q5TC63 336 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 SYCE2Q6PIF2 218 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 CES3Q6UWW8 571 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 GET4Q7L5D6 327 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 KDELC2Q7Z4H8 507 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 AHI1Q8N157 1196 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 CALML6Q8TD86 181 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 MZB1Q8WU39 189 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 TRIB3Q96RU7 358 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 CEP44Q9C0F1 390 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 ZNF576Q9H609 170 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 C20orf96Q9NUD7 363 aaPredicted RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 NKIRAS1Q9NYS0 192 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 INTS6Q9UL03 887 aaKnown RBP15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 CDH7Q9ULB5 785 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 CLEC4EQ9ULY5 219 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 HS3ST2Q9Y278 367 aa15.2■□□□□ 0.02
TRAPPC9-205ENST00000518839 TMEM265A0A087WTH1 108 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 TMEM120BA0PK00 339 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 TTC24A2A3L6 582 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 ERVK-10P10266 1014 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 ADH5P11766 374 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 CSE1LP55060 971 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 RPL26P61254 145 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 SNRPD1P62314 119 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 GNGT1P63211 74 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 IHHQ14623 411 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 UGP2Q16851 508 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 EML3Q32P44 896 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 TSTD2Q5T7W7 516 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 PACS1Q6VY07 963 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 TIFABQ6ZNK6 161 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 KIAA0907Q7Z7F0 614 aaPredicted RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 LMNTD2Q8IXW0 634 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 BRSK1Q8TDC3 778 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 ATP2A3Q93084 1043 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 SGSM3Q96HU1 749 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 EXOC2Q96KP1 924 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 RIPOR3Q96MK2 946 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 SRPK1Q96SB4 655 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 FAM167BQ9BTA0 163 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 KCNK9Q9NPC2 374 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 TREX1Q9NSU2 369 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 INTS9Q9NV88 658 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 HACD3Q9P035 362 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 FBXO10Q9UK96 956 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 RPL26L1Q9UNX3 145 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 FCF1Q9Y324 198 aaKnown RBP15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 RAI2Q9Y5P3 530 aa15.19■□□□□ 0.02
TRAPPC9-205ENST00000518839 MYO9BQ13459 2157 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 FAM47DPA6NHR8 397 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 HEPACAM2A8MVW5 462 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 TRIM49D1C9J1S8 452 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 SOCS5O75159 536 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 CRTAMO95727 393 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 GSRP00390 522 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 ASLP04424 464 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 CYP17A1P05093 508 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 CHN1P15882 459 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 POLR2EP19388 210 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 SPRP35270 261 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 HADHAP40939 763 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 MTHFRP42898 656 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 NUMBP49757 651 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 VASPP50552 380 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 PDE1BQ01064 536 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 MSLNQ13421 630 aaPredicted RBP15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 THOC5Q13769 683 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 GRM3Q14832 879 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 FUT11Q495W5 492 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 TEDDM1Q5T9Z0 273 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 CNTN4Q8IWV2 1026 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 PCDH20Q8N6Y1 951 aaKnown RBP15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 ACMSDQ8TDX5 336 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 RMDN1Q96DB5 314 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 ZFP14Q9HCL3 533 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 SLC8A2Q9UPR5 921 aa15.18■□□□□ 0.02
TRAPPC9-205ENST00000518839 CHKBQ9Y259 395 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms