RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 CSNK1DP48730 415 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 RENBPP51606 427 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 FOXK2Q01167 660 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 NSUN2Q08J23 767 aaKnown RBP eCLIP18.88■□□□□ 0.61
FAM49B-208ENST00000518344 PAFAH1B3Q15102 231 aaKnown RBP18.88■□□□□ 0.61
FAM49B-208ENST00000518344 ODF2Q5BJF6 829 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 NCBP2-AS2Q69YL0 99 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 PAF1Q8N7H5 531 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 MFSD2AQ8NA29 543 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 PSKH2Q96QS6 385 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 MAK16Q9BXY0 300 aaKnown RBP18.88■□□□□ 0.61
FAM49B-208ENST00000518344 ATP13A3Q9H7F0 1226 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 GDF3Q9NR23 364 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 DKK3Q9UBP4 350 aa18.88■□□□□ 0.61
FAM49B-208ENST00000518344 TTC24A2A3L6 582 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-208ENST00000518344 IGLON5A6NGN9 336 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 UPK3BL1B0FP48 263 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 UPK3BL2E5RIL1 263 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 KRT1P04264 644 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 CEACAM1P13688 526 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 HNRNPA2B1P22626 353 aaKnown RBP18.87■□□□□ 0.61
FAM49B-208ENST00000518344 SERPINA4P29622 427 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 IL9RQ01113 521 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 BCL2L1Q07817 233 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 SGCGQ13326 291 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 TMEM259Q4ZIN3 620 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 MARC1Q5VT66 337 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 PIP4P1Q86T03 277 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 RHOT1Q8IXI2 618 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 BBS5Q8N3I7 341 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 PQLC3Q8N755 202 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 SETD7Q8WTS6 366 aaKnown RBP18.87■□□□□ 0.61
FAM49B-208ENST00000518344 ZNF641Q96N77 438 aaPredicted RBP18.87■□□□□ 0.61
FAM49B-208ENST00000518344 CAMK1GQ96NX5 476 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 RNF157Q96PX1 679 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 TUBGCP5Q96RT8 1024 aa18.87■□□□□ 0.61
FAM49B-208ENST00000518344 MAGEC1O60732 1142 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 PEX11BO96011 259 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 ZNF883P0CG24 379 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 FECHP22830 423 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 CDC25BP30305 580 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 CLDN2P57739 230 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 NXPH1P58417 271 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 GALNT2Q10471 571 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 SUZ12Q15022 739 aaKnown RBP18.86■□□□□ 0.61
FAM49B-208ENST00000518344 ZNF423Q2M1K9 1284 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 N4BP2L1Q5TBK1 243 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-208ENST00000518344 LRRC38Q5VT99 294 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 RAD9BQ6WBX8 426 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 LRRC49Q8IUZ0 686 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-208ENST00000518344 HCAR2Q8TDS4 363 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 CXorf40AQ8TE69 158 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 RNF25Q96BH1 459 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-208ENST00000518344 FAF2Q96CS3 445 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 KLHDC7BQ96G42 594 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 BAG1Q99933 345 aaPredicted RBP18.86■□□□□ 0.61
FAM49B-208ENST00000518344 GOLPH3Q9H4A6 298 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 DDX56Q9NY93 547 aaKnown RBP18.86■□□□□ 0.61
FAM49B-208ENST00000518344 IMPACTQ9P2X3 320 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 PCDHB9Q9Y5E1 797 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 ALG6Q9Y672 507 aa18.86■□□□□ 0.61
FAM49B-208ENST00000518344 AREL1O15033 823 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 SPINT1O43278 529 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 MMP20O60882 483 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 THEGLP0DJG4 465 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 GARSP41250 739 aaKnown RBP18.85■□□□□ 0.61
FAM49B-208ENST00000518344 MMP13P45452 471 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 CCT8P50990 548 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 MAXP61244 160 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 AP1S1P61966 158 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 GBE1Q04446 702 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 ITKQ08881 620 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 OVGP1Q12889 678 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 FGL2Q14314 439 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 UGP2Q16851 508 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 BRAT1Q6PJG6 821 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 IQCHQ86VS3 1027 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 NAXDQ8IW45 347 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 PGBD5Q8N414 524 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 TMEM145Q8NBT3 493 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 LRRN4Q8WUT4 740 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 ELF4Q99607 663 aaPredicted RBP18.85■□□□□ 0.61
FAM49B-208ENST00000518344 WRAP53Q9BUR4 548 aaKnown RBP18.85■□□□□ 0.61
FAM49B-208ENST00000518344 SCUBE2Q9NQ36 999 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 PI4KAP42356 2102 aa18.85■□□□□ 0.61
FAM49B-208ENST00000518344 PLXNA2O75051 1894 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 A0A0A6YYK5 440 aaPredicted RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 TSPAN11A1L157 253 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 RCCD1A6NED2 376 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 C3orf70A6NLC5 250 aaPredicted RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 RAD51BO15315 384 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 DFNA5O60443 496 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 HSPA9P38646 679 aaKnown RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 SUOXP51687 545 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 HADHBP55084 474 aaKnown RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 NAP1L1P55209 391 aaKnown RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 ELP6Q0PNE2 266 aa18.84■□□□□ 0.61
FAM49B-208ENST00000518344 IFI16Q16666 785 aaKnown RBP18.84■□□□□ 0.61
FAM49B-208ENST00000518344 ERAP2Q6P179 960 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms