RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 RFC2P35250 354 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC26A3P40879 764 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 ATP12AP54707 1039 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 KIAA1324Q6UXG2 1013 aaKnown RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 PHC3Q8NDX5 983 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 MAGEE2Q8TD90 523 aaPredicted RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 DQX1Q8TE96 717 aaKnown RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZFAND2BQ8WV99 257 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 PPP1R10Q96QC0 940 aaKnown RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 GPATCH1Q9BRR8 931 aaKnown RBP12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 PCDH12Q9NPG4 1184 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 HPS4Q9NQG7 708 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 PSMD13Q9UNM6 376 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 STON1Q9Y6Q2 735 aa12.36□□□□□ -0.43
PCDHGA6-201ENST00000517434 A0A1W2PQ67 120 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 TSPAN3O60637 253 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ETS1P14921 441 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 FGFR3P22607 806 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 PIK3CGP48736 1102 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ANKRD52Q8NB46 1076 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 TMEM121Q9BTD3 319 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 OSBPL7Q9BZF2 842 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 KCTD10Q9H3F6 313 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 NALCNQ8IZF0 1738 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SYN3O14994 580 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 GSC2O15499 205 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 IFNA14P01570 189 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 APODP05090 189 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 MPOP05164 745 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 DBTP11182 482 aaKnown RBP12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 WARSP23381 471 aaKnown RBP12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ELK3P41970 407 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 GLRBP48167 497 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 MPP3Q13368 585 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 STRA8Q7Z7C7 330 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 MON1AQ86VX9 555 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZCCHC9Q8N567 271 aaKnown RBP12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 UXS1Q8NBZ7 420 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 B3GALNT2Q8NCR0 500 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 TMEM161BQ8NDZ6 487 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 REPS1Q96D71 796 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 RIBC2Q9H4K1 309 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 MARCH7Q9H992 704 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZDHHC4Q9NPG8 344 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 PRPF19Q9UMS4 504 aaKnown RBP12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 CCDC162PA2VCL2 907 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SAGE2PA6NJ88 616 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 CYP3A5P20815 502 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SGO1Q5FBB7 561 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SH3D19Q5HYK7 790 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ZBTB46Q86UZ6 589 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC22A9Q8IVM8 553 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 A0A1W2PRG6 482 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 TRIM38O00635 465 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 MAGEC1O60732 1142 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 EDF1O60869 148 aaKnown RBP12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ENDOD1O94919 500 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SSTR1P30872 391 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 MAGEA8P43361 318 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 FOXR2Q6PJQ5 311 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 ABHD15Q6UXT9 468 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 AHI1Q8N157 1196 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLC35C1Q96A29 364 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 BTBD9Q96Q07 612 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 TCF12Q99081 682 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 SLIT2O94813 1529 aa12.35□□□□□ -0.43
PCDHGA6-201ENST00000517434 FAM237BA0A1B0GVD1 139 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 SPTLC1O15269 473 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ANXA6P08133 673 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 YBX3P16989 372 aaKnown RBP eCLIP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ITGB5P18084 799 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 FLT3P36888 993 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 IST1P53990 364 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 AIF1P55008 147 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 SCARA3Q6AZY7 606 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 LEMD2Q8NC56 503 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 C2orf15Q8WU43 125 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 PTCD3Q96EY7 689 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ABHD2P08910 425 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 SNHG28P0DPA3 235 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 COX4I1P13073 169 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 SRP54P61011 504 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 CNPY1Q3B7I2 92 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 MCFD2Q8NI22 146 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ETNPPLQ8TBG4 499 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ACTL9Q8TC94 416 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 LRRC20Q8TCA0 184 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ATP13A3Q9H7F0 1226 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 CYP4F12Q9HCS2 524 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 POLG2Q9UHN1 485 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 C3orf18Q9UK00 162 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 GSTK1Q9Y2Q3 226 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 CRYL1Q9Y2S2 319 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 HAT1O14929 419 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 TRUB2O95900 331 aaKnown RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 ATF4P18848 351 aaPredicted RBP12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 OR1D2P34982 312 aa12.34□□□□□ -0.43
PCDHGA6-201ENST00000517434 CAPZA2P47755 286 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms