RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 TPSB2P20231 275 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 CD86P42081 329 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ASPAP45381 313 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 C16orf72Q14CZ0 275 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 TPSAB1Q15661 275 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 DDR2Q16832 855 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 LENG8Q96PV6 779 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 OMDQ99983 421 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 CCDC106Q9BWC9 280 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 TM6SF2Q9BZW4 377 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 CAB39LQ9H9S4 337 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 CYLDQ9NQC7 956 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 TMEM216Q9P0N5 145 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 UBA2Q9UBT2 640 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZMYM5Q9UJ78 669 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 MYO9BQ13459 2157 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 SRCAPQ6ZRS2 3230 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 PARNO95453 639 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ALOX15P16050 662 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 AOC1P19801 751 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 TUFMP49411 452 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 MRPS6P82932 125 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ANKS6Q68DC2 871 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 CLVS1Q8IUQ0 354 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 UNC5BQ8IZJ1 945 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 RP9Q8TA86 221 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 PPP1R10Q96QC0 940 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 C1orf21Q9H246 121 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 PARVBQ9HBI1 364 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 VTI1BQ9UEU0 232 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 RGS17Q9UGC6 210 aaPredicted RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 GNEQ9Y223 722 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ARIH2O95376 493 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 METTL18O95568 372 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF682O95780 498 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 DDX5P17844 614 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ATP6V1B2P21281 511 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 MPSTP25325 297 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ATP5C1P36542 298 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 SERPINH1P50454 418 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 SLC22A9Q8IVM8 553 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 KBTBD2Q8IY47 623 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 SPATA6LQ8N4H0 392 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 FNDC5Q8NAU1 212 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ACTRT2Q8TDY3 377 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 MYLPFQ96A32 169 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 SIRPGQ9P1W8 387 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ASB3Q9Y575 518 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 TMEM114B3SHH9 223 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 GPR25O00155 361 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 HDAC3O15379 428 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ITGAXP20702 1163 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 GRIA1P42261 906 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 GRIA4P48058 902 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF781Q8N8C0 355 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 PCDH19Q8TAB3 1148 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 POLR1EQ9GZS1 481 aaKnown RBP10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 IL22Q9GZX6 179 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 AK5Q9Y6K8 562 aa10.93□□□□□ -0.66
PCDHGA1-202ENST00000517417 MGAT4DA6NG13 374 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 RFPL1O75677 317 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 TSPAN8P19075 237 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 GPC1P35052 558 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 MATKP42679 507 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CLK1P49759 484 aaKnown RBP10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CAMK2GQ13555 558 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CTC1Q2NKJ3 1217 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 OTUD3Q5T2D3 398 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 GATA6Q92908 595 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 ALG9Q9H6U8 611 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 PTTG2Q9NZH5 202 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 MPP6Q9NZW5 540 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 AP4S1Q9Y587 144 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 SMIM28A0A1B0GU29 152 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CILPO75339 1184 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 USP2O75604 605 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CKBP12277 381 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 GRM5P41594 1212 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 ETV4P43268 484 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 GALK1P51570 392 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 UBE3AQ05086 875 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CTBP1Q13363 440 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 DEFB115Q30KQ5 88 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 DUSP28Q4G0W2 176 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 AMIGO2Q86SJ2 522 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 DSELQ8IZU8 1212 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 C1orf127Q8N9H9 656 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 FAM210AQ96ND0 272 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 EMILIN2Q9BXX0 1053 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 POMKQ9H5K3 350 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 PNPLA8Q9NP80 782 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 FAM105AQ9NUU6 356 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 SEPT3Q9UH03 358 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 KPNA3O00505 521 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 PAPSS1O43252 624 aaPredicted RBP10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 CCDC166P0CW27 439 aa10.92□□□□□ -0.66
PCDHGA1-202ENST00000517417 ZNF7P17097 686 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms