RNA–Protein interactions for RNA: ENST00000514949.1

SNX2-213, Transcript of sorting nexin 2, humanhuman

TSL 2 BASIC

Gene SNX2, Length 2,119 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX2-213ENST00000514949 ZNF460Q14592 562 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 NAIF1Q69YI7 327 aaPredicted RBP17.68■□□□□ 0.42
SNX2-213ENST00000514949 GDF6Q6KF10 455 aaPredicted RBP17.68■□□□□ 0.42
SNX2-213ENST00000514949 TRIM67Q6ZTA4 783 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 SCD5Q86SK9 330 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 THEM5Q8N1Q8 247 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 HIPK4Q8NE63 616 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 CEP70Q8NHQ1 597 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 CALML6Q8TD86 181 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 CASP10Q92851 521 aa17.68■□□□□ 0.42
SNX2-213ENST00000514949 UPF1Q92900 1129 aaKnown RBP eCLIP17.68■□□□□ 0.42
SNX2-213ENST00000514949 AGO3Q9H9G7 860 aaKnown RBP17.68■□□□□ 0.42
SNX2-213ENST00000514949 COPG1Q9Y678 874 aaKnown RBP17.68■□□□□ 0.42
SNX2-213ENST00000514949 A0A0U1RQF3 1178 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 HEATR9A2RTY3 570 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 MYADML2A6NDP7 307 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 E9PAM4 449 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 BCAS2O75934 225 aaPredicted RBP17.67■□□□□ 0.42
SNX2-213ENST00000514949 PAPOLAP51003 745 aaKnown RBP17.67■□□□□ 0.42
SNX2-213ENST00000514949 SLC5A3P53794 718 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 PFKPQ01813 784 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 TUSC3Q13454 348 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 CEACAM7Q14002 265 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 DSC3Q14574 896 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 PSMD5Q16401 504 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 LRRC36Q1X8D7 754 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 FAM83EQ2M2I3 478 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 TECRLQ5HYJ1 363 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 TMEM198Q66K66 360 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 OVOS1Q6IE37 1185 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 TICAM1Q8IUC6 712 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 UMODL1-AS1Q8N2C9 162 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 C2orf69Q8N8R5 385 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 SPDYE1Q8NFV5 336 aaPredicted RBP17.67■□□□□ 0.42
SNX2-213ENST00000514949 GABPB2Q8TAK5 448 aaPredicted RBP17.67■□□□□ 0.42
SNX2-213ENST00000514949 ELMO2Q96JJ3 720 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 SUSD3Q96L08 255 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 CATSPER2Q96P56 530 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 WDR41Q9HAD4 459 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 PIDD1Q9HB75 910 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 ACSS2Q9NR19 701 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 VPS45Q9NRW7 570 aa17.67■□□□□ 0.42
SNX2-213ENST00000514949 KIF3CO14782 793 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 PMPCBO75439 489 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 PENKP01210 267 aaPredicted RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 ME2P23368 584 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 CLCN5P51795 746 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 WNT3AP56704 352 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 TSPY1Q01534 308 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 ROR2Q01974 943 aaKnown RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 TNK2Q07912 1038 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 FLOT2Q14254 428 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 MMEL1Q495T6 779 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 ST13P4Q8IZP2 240 aaPredicted RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 MARVELD2Q8N4S9 558 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 ICA1LQ8NDH6 482 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 IMP4Q96G21 291 aaKnown RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 UBXN10Q96LJ8 280 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 TMEM209Q96SK2 561 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 NOL6Q9H6R4 1146 aaKnown RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 IPO11Q9UI26 975 aaKnown RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 INPP5FQ9Y2H2 1132 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 HS3ST4Q9Y661 456 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 XRCC1P18887 633 aaPredicted RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 SLC26A3P40879 764 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 SLC12A2P55011 1212 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 AGAP9Q5VTM2 703 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNX2-213ENST00000514949 CCNYL1Q8N7R7 359 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 CATSPER1Q8NEC5 780 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 SOCS4Q8WXH5 440 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 NCSTNQ92542 709 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 POMKQ9H5K3 350 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 SFMBT1Q9UHJ3 866 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 RIMS3Q9UJD0 308 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 DTNAQ9Y4J8 743 aa17.66■□□□□ 0.42
SNX2-213ENST00000514949 TDRD15B5MCY1 1934 aaKnown RBP17.66■□□□□ 0.42
SNX2-213ENST00000514949 ACOT8O14734 319 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 INPPL1O15357 1258 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 WISP3O95389 354 aaPredicted RBP17.65■□□□□ 0.42
SNX2-213ENST00000514949 DPP6P42658 865 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 PGFP49763 221 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 NDST2P52849 883 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 SULT2A1Q06520 285 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 ILF2Q12905 390 aaKnown RBP17.65■□□□□ 0.42
SNX2-213ENST00000514949 ART3Q13508 389 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 PDCD2Q16342 344 aaPredicted RBP17.65■□□□□ 0.42
SNX2-213ENST00000514949 LIN52Q52LA3 116 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 NXNQ6DKJ4 435 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 CNSTQ6PJW8 725 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 UGT2A3Q6UWM9 527 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 MFN1Q8IWA4 741 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 ADCY4Q8NFM4 1077 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 TSPAN17Q96FV3 270 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 SLC39A13Q96H72 371 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 PPP1R36Q96LQ0 422 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 SERPINB11Q96P15 392 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 MEAF6Q9HAF1 191 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 PADI3Q9ULW8 664 aa17.65■□□□□ 0.42
SNX2-213ENST00000514949 MSI1O43347 362 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms