RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 FSTL5Q8N475 847 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GDAP1Q8TB36 358 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAR1Q8WVX9 515 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KIFAP3Q92845 792 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MCUR1Q96AQ8 359 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP6V1G3Q96LB4 118 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PPP1R36Q96LQ0 422 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 OLFM1Q99784 485 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MOV10L1Q9BXT6 1211 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF717Q9BY31 904 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM54Q9BYV2 358 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLHL25Q9H0H3 589 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PIGUQ9H490 435 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 IGFLR1Q9H665 355 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF696Q9H7X3 374 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DNAJC11Q9NVH1 559 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 OBP2AQ9NY56 170 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 VNN3Q9NY84 501 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PLA2G2EQ9NZK7 142 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PKD2L1Q9P0L9 805 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 UVRAGQ9P2Y5 699 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 STOML1Q9UBI4 398 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZC3H7BQ9UGR2 993 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPS6KA6Q9UK32 745 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PACSIN3Q9UKS6 424 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRFN2Q9ULH4 789 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LHX6Q9UPM6 363 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 STK38LQ9Y2H1 464 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRG3Q9Y2Y8 225 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ESPL1Q14674 2120 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PKDREJQ9NTG1 2253 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGEF35A5YM69 484 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SPATA31C2B4DYI2 1134 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SSX4O60224 188 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PIAS1O75925 651 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KCNK2O95069 426 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GUCA1CO95843 209 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 HSD3B1P14060 373 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAP1GAPP47736 663 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 KPNA1P52294 538 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 POLGP54098 1239 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RIPPLY3P57055 190 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RPL7AP62424 266 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GSTO1P78417 241 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP11AP98196 1134 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLC7A5Q01650 507 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAP2K5Q13163 448 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DYNC1I2Q13409 638 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ORC2Q13416 577 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PTK6Q13882 451 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCBP1Q15365 356 aaKnown RBP eCLIP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF174Q15697 407 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EXOC3L4Q17RC7 722 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 WHAMMP3Q1A5X7 153 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRRC26Q2I0M4 334 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MPEG1Q2M385 716 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LETM2Q2VYF4 491 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CFAP221Q4G0U5 840 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM47CQ5HY64 1035 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 CEP85LQ5SZL2 805 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RNF220Q5VTB9 566 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAP1SQ66K74 1059 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SLFN13Q68D06 897 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AFTPHQ6ULP2 937 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 RAB44Q7Z6P3 723 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM135Q86UB9 458 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DEPDC4Q8N2C3 294 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMTC2Q8N394 836 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TTC8Q8TAM2 541 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ITFG2Q969R8 447 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ELMO3Q96BJ8 720 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EFHD2Q96C19 240 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MRPL48Q96GC5 212 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TOE1Q96GM8 510 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF300Q96RE9 604 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EBF4Q9BQW3 602 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 NT5C1AQ9BXI3 368 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 AMBRA1Q9C0C7 1298 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 THAP2Q9H0W7 228 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SP110Q9HB58 689 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 DYRK4Q9NR20 520 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 PARVAQ9NVD7 372 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SAMD15Q9P1V8 674 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 LARSQ9P2J5 1176 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 MBD2Q9UBB5 411 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 VTI1BQ9UEU0 232 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 SAP30BPQ9UHR5 308 aaKnown RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EVLQ9UI08 416 aaPredicted RBP1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 EXOC7Q9UPT5 735 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 GINS2Q9Y248 185 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM98Q9Y2Y6 226 aa1.68□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM221AA4D161 298 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 FAM159BA6NKW6 160 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF487B1APH4 448 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRR23D1E9PI22 279 aaPredicted RBP1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 GOLGA8TH3BQL2 631 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 I3L4J1 428 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 M0QX08 132 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 C2CD2LO14523 706 aa1.67□□□□□ -2.14
TRAPPC13-211ENST00000512009 AURKAO14965 403 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms