RNA–Protein interactions for RNA: ENST00000511653.1

COPS4-209, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 1 (best) BASIC

Gene COPS4, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-209ENST00000511653 GOLGA7BQ2TAP0 167 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 ZCWPW2Q504Y3 356 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 MPPE1Q53F39 396 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 PRAMEF14Q5SWL7 426 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 ARHGAP17Q68EM7 881 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 PM20D1Q6GTS8 502 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 RFWD3Q6PCD5 774 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 DHRS13Q6UX07 377 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 RNF111Q6ZNA4 994 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 INTS8Q75QN2 995 aaKnown RBP6.89□□□□□ -1.31
COPS4-209ENST00000511653 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.89□□□□□ -1.31
COPS4-209ENST00000511653 MYEOVQ96EZ4 313 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 TMEM176AQ96HP8 235 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 PCED1AQ9H1Q7 454 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 CARS2Q9HA77 564 aaKnown RBP6.89□□□□□ -1.31
COPS4-209ENST00000511653 EBF2Q9HAK2 575 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 PRDM7Q9NQW5 492 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 GGA2Q9UJY4 613 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 TSPAN16Q9UKR8 245 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 NBASA2RRP1 2371 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 RP1P56715 2156 aa6.89□□□□□ -1.31
COPS4-209ENST00000511653 GOLGA6L7A0A1B0GV03 622 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 SSU72P8A0A1W2PR75 194 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 RHOBTB3O94955 611 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 PRB1P04280 392 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 WNT1P04628 370 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 CD8BP10966 210 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 SLC6A4P31645 630 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 GRK6P43250 576 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 CCT8P50990 548 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 LAPTM5Q13571 262 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 SEPT7Q16181 437 aaKnown RBP6.88□□□□□ -1.31
COPS4-209ENST00000511653 NFIL3Q16649 462 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 CBWD6Q4V339 395 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 FAM133BQ5BKY9 247 aaKnown RBP6.88□□□□□ -1.31
COPS4-209ENST00000511653 RALGPS1Q5JS13 557 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 CBWD3Q5JTY5 395 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 CBWD5Q5RIA9 395 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 ACBD5Q5T8D3 534 aaPredicted RBP6.88□□□□□ -1.31
COPS4-209ENST00000511653 KRT39Q6A163 491 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 GATAD2AQ86YP4 633 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 ARHGAP18Q8N392 663 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 ANKRD52Q8NB46 1076 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 WFIKKN2Q8TEU8 576 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 IGSF8Q969P0 613 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 PRICKLE1Q96MT3 831 aaPredicted RBP6.88□□□□□ -1.31
COPS4-209ENST00000511653 BTBD1Q9H0C5 482 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 STOML2Q9UJZ1 356 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 RCOR1Q9UKL0 485 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 RNF112Q9ULX5 631 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 HPSEQ9Y251 543 aa6.88□□□□□ -1.31
COPS4-209ENST00000511653 A0A087WV48 116 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 FAM47DPA6NHR8 397 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 PLK4O00444 970 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 WNT9AO14904 365 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 XPO1O14980 1071 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 TNFSF14O43557 240 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 PCDHGA12O60330 932 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 DNTTP04053 509 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 DLDP09622 509 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 KRT13P13646 458 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 CD27P26842 260 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 PSMC2P35998 433 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 HARS2P49590 506 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 NDUFA8P51970 172 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 BCAT1P54687 386 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 DNAJC3Q13217 504 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 ADAM9Q13443 819 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 KCNJ12Q14500 433 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 KIR3DS1Q14943 382 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 SHBQ15464 509 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 TESK1Q15569 626 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 TTC31Q49AM3 519 aaPredicted RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 ADGRF1Q5T601 910 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 BSPRYQ5W0U4 402 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 NADSYN1Q6IA69 706 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 MMS22LQ6ZRQ5 1243 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 MAMDC2Q7Z304 686 aaPredicted RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 AHI1Q8N157 1196 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 GALNT15Q8N3T1 639 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 GUF1Q8N442 669 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 FBXL13Q8NEE6 735 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 UBA3Q8TBC4 463 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 PIP4K2CQ8TBX8 421 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 DIO2Q92813 273 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 UBXN6Q9BZV1 441 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 LRRC4Q9HBW1 653 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 RAB20Q9NX57 234 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 FTSJ1Q9UET6 329 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 INTS6Q9UL03 887 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 HBS1LQ9Y450 684 aaKnown RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 TRPM6Q9BX84 2022 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 A0A1B0GTQ1 180 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 C7orf72A4D263 438 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 C10orf142B7Z368 130 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 O00370 1275 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 MID1O15344 667 aa6.87□□□□□ -1.31
COPS4-209ENST00000511653 PAPSS1O43252 624 aaPredicted RBP6.87□□□□□ -1.31
COPS4-209ENST00000511653 TIMM44O43615 452 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 153.5 ms