RNA–Protein interactions for RNA: ENST00000510196.6

GYPB-211, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 508 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-211ENST00000510196 ZNF318Q5VUA4 2279 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 DMDP11532 3685 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 MED19A0JLT2 244 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 GOLGA8IPA6NC78 632 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 GOLGA8JA6NMD2 632 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 HEPACAM2A8MVW5 462 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 LACTBL1A8MY62 500 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 TISP43B9A030 160 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 CYB561D2O14569 222 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 PLD2O14939 933 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 ZNF263O14978 683 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 NCAM2O15394 837 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 LYPLA2O95372 231 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 TUBB4AP04350 444 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 CENPBP07199 599 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 HNRNPA1P09651 372 aaKnown RBP eCLIP3.16□□□□□ -1.9
GYPB-211ENST00000510196 ELFN1P0C7U0 828 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 XRCC6P12956 609 aaKnown RBP eCLIP3.16□□□□□ -1.9
GYPB-211ENST00000510196 ACAT1P24752 427 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 CTSSP25774 331 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 GABRR2P28476 465 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 NMT1P30419 496 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 HOXC13P31276 330 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 NBL1P41271 181 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 CCR2P41597 374 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 TOB1P50616 345 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 TFAMQ00059 246 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 YWHAHQ04917 246 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 POU5F1BQ06416 359 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 BFSP1Q12934 665 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 MTAPQ13126 283 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 KARSQ15046 597 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 PON2Q15165 354 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 PCBP1Q15365 356 aaKnown RBP eCLIP3.16□□□□□ -1.92e-29■■■■■ 27.7
GYPB-211ENST00000510196 IL17AQ16552 155 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 UPP1Q16831 310 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 MGAT5BQ3V5L5 792 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 TMEM119Q4V9L6 283 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 SLC39A12Q504Y0 691 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 ZC2HC1CQ53FD0 456 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 GPR158Q5T848 1215 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 LMBRD2Q68DH5 695 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 CDCA2Q69YH5 1023 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 ADALQ6DHV7 355 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 JADE1Q6IE81 842 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 FAM173BQ6P4H8 233 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 PDXDC1Q6P996 788 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 Q6ZTC4 211 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 ZNF572Q7Z3I7 529 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 HAUS6Q7Z4H7 955 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 METTL23Q86XA0 190 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 DDX42Q86XP3 938 aaKnown RBP eCLIP3.16□□□□□ -1.9
GYPB-211ENST00000510196 WDR75Q8IWA0 830 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 SCN4BQ8IWT1 228 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 SYCP3Q8IZU3 236 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 KRT78Q8N1N4 520 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 PDILTQ8N807 584 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 APPL2Q8NEU8 664 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 CMASQ8NFW8 434 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 LEO1Q8WVC0 666 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 CASKIN2Q8WXE0 1202 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 RSPH1Q8WYR4 309 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 POMGNT1Q8WZA1 660 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 FAM3CQ92520 227 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 RUBCNQ92622 972 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 SECISBP2LQ93073 1101 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 RMDN1Q96DB5 314 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 SAAL1Q96ER3 474 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 CLUHP3Q96NS8 147 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 GCNAQ96QF7 691 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 PYM1Q9BRP8 204 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 PI4K2AQ9BTU6 479 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 VPS16Q9H269 839 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 FOXP1Q9H334 677 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 CAAP1Q9H8G2 361 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 LTB4R2Q9NPC1 389 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 SLC38A7Q9NVC3 462 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 GTSE1Q9NYZ3 720 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 EPS15L1Q9UBC2 864 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 MTRRQ9UBK8 725 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 USP25Q9UHP3 1055 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 GMEB2Q9UKD1 530 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 TNFSF13BQ9Y275 285 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 MRPS17Q9Y2R5 130 aaKnown RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 KIF3AQ9Y496 699 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 INSL5Q9Y5Q6 135 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 EP300Q09472 2414 aaPredicted RBP3.16□□□□□ -1.9
GYPB-211ENST00000510196 CACNA1HO95180 2353 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 PHLPP2Q6ZVD8 1323 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 CFAP54Q96N23 3096 aa3.16□□□□□ -1.9
GYPB-211ENST00000510196 TDRD15B5MCY1 1934 aaKnown RBP3.15□□□□□ -1.9
GYPB-211ENST00000510196 C2orf16Q68DN1 1984 aa3.15□□□□□ -1.91
GYPB-211ENST00000510196 A0A087X0B3 334 aa3.15□□□□□ -1.91
GYPB-211ENST00000510196 LOC105378220A0A1B0GUY1 285 aaPredicted RBP3.15□□□□□ -1.91
GYPB-211ENST00000510196 PRSS38A1L453 326 aa3.15□□□□□ -1.91
GYPB-211ENST00000510196 ANKRD63C9JTQ0 380 aa3.15□□□□□ -1.91
GYPB-211ENST00000510196 ANHXE9PGG2 379 aa3.15□□□□□ -1.91
GYPB-211ENST00000510196 ZNF197O14709 1029 aa3.15□□□□□ -1.91
GYPB-211ENST00000510196 EPB41L2O43491 1005 aaKnown RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms