RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 NUDT5Q9UKK9 219 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 MRPL42Q9Y6G3 142 aaKnown RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 TRPM7Q96QT4 1865 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 CFLARO15519 480 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 JUNP05412 331 aaKnown RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 FESP07332 822 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 ENO3P13929 434 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 CD1EP15812 388 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 RENBPP51606 427 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 AQP4P55087 323 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 MLLT6P55198 1093 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 YWHAHQ04917 246 aaPredicted RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 FLOT2Q14254 428 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 CSHL1Q14406 222 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 GRAMD1BQ3KR37 738 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 AGAP9Q5VTM2 703 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 KLC3Q6P597 504 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 C17orf99Q6UX52 265 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 C14orf80Q86SX3 495 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 SCN4BQ8IWT1 228 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 TXNDC5Q8NBS9 432 aaKnown RBP18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 CEP70Q8NHQ1 597 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 C1orf74Q96LT6 269 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 MRGBPQ9NV56 204 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 PACSIN3Q9UKS6 424 aa18.1■□□□□ 0.49
CCHCR1-228ENST00000509552 A0A1W2PQH9 124 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 WASH4PA8MWX3 477 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 AHCYL1O43865 530 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 RNASEH1O60930 286 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 PGFP49763 221 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 RPL26P61254 145 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ITKQ08881 620 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 MMEL1Q495T6 779 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ZFP1Q6P2D0 407 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 CNSTQ6PJW8 725 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 TRPV1Q8NER1 839 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 TSPAN17Q96FV3 270 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 FAR2Q96K12 515 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ADAM2Q99965 735 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 WDR41Q9HAD4 459 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 NMUR1Q9HB89 426 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ARNT2Q9HBZ2 717 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 EML4Q9HC35 981 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 COPG1Q9Y678 874 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ALDH1A3P47895 512 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 SERPINH1P50454 418 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 CLCN5P51795 746 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 THOP1P52888 689 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 SATB1Q01826 763 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 MSLNQ13421 630 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ZNF423Q2M1K9 1284 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 PIGGQ5H8A4 983 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 KDELC1Q6UW63 502 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 ST13P4Q8IZP2 240 aaPredicted RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 PQLC1Q8N2U9 271 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 PHC3Q8NDX5 983 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 MAELQ96JY0 434 aaKnown RBP18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 MARK4Q96L34 752 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 IGSF5Q9NSI5 407 aa18.09■□□□□ 0.49
CCHCR1-228ENST00000509552 SCN10AQ9Y5Y9 1956 aa18.08■□□□□ 0.49
CCHCR1-228ENST00000509552 ITGB1P05556 798 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC2A3P11169 496 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 VCLP18206 1134 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 ARTNQ5T4W7 220 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 OGFRL1Q5TC84 451 aaPredicted RBP18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 RNF135Q8IUD6 432 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 BTBD9Q96Q07 612 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 RANBP9Q96S59 729 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 NDNQ99608 321 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 NT5MQ9NPB1 228 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 DTNAQ9Y4J8 743 aa18.08■□□□□ 0.48
CCHCR1-228ENST00000509552 MANSC4A6NHS7 340 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 TMEM233B4DJY2 109 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 MAP3K13O43283 966 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 RBP1P09455 135 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 LTA4HP09960 611 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 ME2P23368 584 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 LEPRP48357 1165 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 NDST2P52849 883 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 HUNKP57058 714 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 DSC3Q14574 896 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 RFTN1Q14699 578 aaPredicted RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 SLC39A12Q504Y0 691 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 TECRLQ5HYJ1 363 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 RBM20Q5T481 1227 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 IMP4Q96G21 291 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 LRGUKQ96M69 825 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 VPS45Q9NRW7 570 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 PCDHB8Q9UN66 801 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 TLR6Q9Y2C9 796 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 TDRD15B5MCY1 1934 aaKnown RBP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 PTPRDP23468 1912 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 SDHDO14521 159 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 AURKAO14965 403 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 HNRNPLP14866 589 aaKnown RBP eCLIP18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 NOMO2Q5JPE7 1267 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 PIK3R6Q5UE93 754 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 MARC1Q5VT66 337 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 MON1AQ86VX9 555 aa18.07■□□□□ 0.48
CCHCR1-228ENST00000509552 UMODL1-AS1Q8N2C9 162 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms