RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 FOXB2Q5VYV0 432 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 IZUMO3Q5VZ72 239 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FBXW10Q5XX13 1052 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CD276Q5ZPR3 534 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ATG9BQ674R7 924 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 GTF2IRD2BQ6EKJ0 949 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FAM122CQ6P4D5 195 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZCCHC12Q6PEW1 402 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 APOA5Q6Q788 366 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 DEGS2Q6QHC5 323 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 Q6YL49 198 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF852Q6ZMS4 543 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PTF1AQ7RTS3 328 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 OVCH2Q7RTZ1 564 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CACNA2D4Q7Z3S7 1137 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 GTF2IRD2Q86UP8 949 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LRRC6Q86X45 466 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 DNAAF5Q86Y56 855 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CPOQ8IVL8 374 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PYROXD2Q8N2H3 581 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 BBS5Q8N3I7 341 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FBXW8Q8N3Y1 598 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TSPYL6Q8N831 410 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 MRPL43Q8N983 215 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SCAIQ8N9R8 606 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ATAD1Q8NBU5 361 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CNNM3Q8NE01 707 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SLC24A4Q8NFF2 622 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 URGCPQ8TCY9 931 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 MAGEC3Q8TD91 643 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SCFD1Q8WVM8 642 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LMBR1Q8WVP7 490 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ASZ1Q8WWH4 475 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CLEC4DQ8WXI8 215 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF566Q969W8 418 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PIWIL1Q96J94 861 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 C16orf92Q96LL3 132 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 USP28Q96RU2 1077 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 DMRTA2Q96SC8 542 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PIP5K1AQ99755 562 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 IFIH1Q9BYX4 1025 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 NUF2Q9BZD4 464 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZDHHC5Q9C0B5 715 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF518BQ9C0D4 1074 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 GBA3Q9H227 469 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 NEK6Q9HC98 313 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PREBQ9HCU5 417 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 DECR2Q9NUI1 292 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 INTS13Q9NVM9 706 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 IPO11Q9UI26 975 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RPH3AQ9Y2J0 694 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SIK3Q9Y2K2 1263 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZKSCAN5Q9Y2L8 839 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SNX9Q9Y5X1 595 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 IGSF1Q8N6C5 1336 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 BLMP54132 1417 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC141Q6ZP82 1450 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 GOLGA8QA0A0J9YX86 632 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 MACROD2A1Z1Q3 448 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GOLGA8OA6NCC3 632 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SNTNA6NMZ2 147 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 BTBD19C9JJ37 291 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 FAM227AF5H4B4 570 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SPECC1L-ADORA2AF8WAN1 911 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GOLGA8NF8WBI6 632 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 O00370 1275 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PPEF2O14830 753 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ADAMTS3O15072 1205 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CLDN3O15551 220 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 MEFVO15553 781 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 EXOC3O60645 756 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CYTIPO60759 359 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SCGB1D1O95968 90 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 HMGCRP04035 888 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 EIF2S1P05198 315 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 SERPINF2P08697 491 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PRPS2P11908 318 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 APEHP13798 732 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CHN1P15882 459 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 HOXB8P17481 243 aaPredicted RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CPN2P22792 545 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CRABP2P29373 138 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TKTP29401 623 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 NMT1P30419 496 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GARSP41250 739 aaKnown RBP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 DPP6P42658 865 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 AARSP49588 968 aaKnown RBP eCLIP4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ADCY7P51828 1080 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 MAPK10P53779 464 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PRRX1P54821 245 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 CASP6P55212 293 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 RAB14P61106 215 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 OCRLQ01968 901 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GCNT1Q02742 428 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 TLE2Q04725 743 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 PPARAQ07869 468 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GOLGA8FQ08AF8 430 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 GOLGA8DPQ0D2H9 430 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 ELP6Q0PNE2 266 aa4.61□□□□□ -1.67
NIPBL-206ENST00000509429 NCAPHQ15003 741 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms