RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 PLRG1O43660 514 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 NDUFB5O43674 189 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 RNF8O76064 485 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SEMA4FO95754 770 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 GSRP00390 522 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 IL1BP01584 269 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 KRT1P04264 644 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 PRKCGP05129 697 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 VSIG8P0DPA2 414 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CHRNA3P32297 505 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 GMPRP36959 345 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CDKN2BP42772 138 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 HCAR3P49019 387 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 VAV2P52735 878 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 NDST2P52849 883 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ST8SIA6P61647 398 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SEMG2Q02383 582 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CREB5Q02930 508 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SULT2A1Q06520 285 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF33AQ06730 810 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC10A7Q0GE19 358 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 GALNT2Q10471 571 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ZBTB17Q13105 803 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 POLD3Q15054 466 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 PAFAH1B3Q15102 231 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 LLGL1Q15334 1064 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CSRP2Q16527 193 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ANKRD20A8PQ5CZ79 823 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ACBD5Q5T8D3 534 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 LYSMD4Q5XG99 296 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SEL1L3Q68CR1 1132 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SLC9A4Q6AI14 798 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SDE2Q6IQ49 451 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ALKBH2Q6NS38 261 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 C11orf63Q6NUN7 778 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 RHOT2Q8IXI1 618 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CCDC170Q8IYT3 715 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 HDDC3Q8N4P3 179 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 PCDH20Q8N6Y1 951 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 DNASE2BQ8WZ79 361 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 MAML1Q92585 1016 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ALG3Q92685 438 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 BIRC7Q96CA5 298 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 LOXL4Q96JB6 756 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SPACA7Q96KW9 195 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 DMRTB1Q96MA1 342 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 OLFM3Q96PB7 478 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 BAG1Q99933 345 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 CATSPERBQ9H7T0 1116 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 FBRSQ9HAH7 460 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNHIT6Q9NWK9 470 aaKnown RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 FBXL12Q9NXK8 326 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 DTLQ9NZJ0 730 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 SUN2Q9UH99 717 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 EVLQ9UI08 416 aaPredicted RBP7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 PLA2G4CQ9UP65 541 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 LRP4O75096 1905 aa7.31□□□□□ -1.24
TOPBP1-207ENST00000509162 FREM2Q5SZK8 3169 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 SCN8AQ9UQD0 1980 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 hCG_1818297A0A087WSY0 165 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 A0A0U1RQS6 177 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 CXorf51AA0A1B0GTR3 108 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 METTL12A8MUP2 240 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 BTNL10A8MVZ5 291 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 DFFAO00273 331 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 CDK2AP1O14519 115 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 TM4SF5O14894 197 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 AREL1O15033 823 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 DDX3YO15523 660 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 LATO43561 262 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ZNF217O75362 1048 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 RNASEH2AO75792 299 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 DNTTP04053 509 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 UGT2B4P06133 528 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 TPM1P09493 284 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 KRT10P13645 584 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PRLRP16471 622 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 C5AR1P21730 350 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 KDELR1P24390 212 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ETFBP38117 255 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 YBEYP58557 167 aaPredicted RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PSMA6P60900 246 aaKnown RBP7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 MAXP61244 160 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 KRT83P78385 493 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 IRX4P78413 519 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ZBTB16Q05516 673 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 TRAF2Q12933 501 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 RALGDSQ12967 914 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 GRIK2Q13002 908 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 SHBQ15464 509 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ELF2Q15723 593 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 ACCSLQ4AC99 568 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 BOLA3Q53S33 107 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 CARD16Q5EG05 197 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 KCTD16Q68DU8 428 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 KIAA0895LQ68EN5 471 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 USP30Q70CQ3 517 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 LPCAT2Q7L5N7 544 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 TMTC1Q8IUR5 882 aa7.3□□□□□ -1.24
TOPBP1-207ENST00000509162 PELI3Q8N2H9 469 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms