RNA–Protein interactions for RNA: ENST00000509006.1

DEPDC1B-204, Transcript of DEP domain containing 1B, humanhuman

TSL 4

Gene DEPDC1B, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-204ENST00000509006 SEL1LQ9UBV2 794 aa2.54□□□□□ -2
DEPDC1B-204ENST00000509006 ADD3Q9UEY8 706 aaKnown RBP2.54□□□□□ -2
DEPDC1B-204ENST00000509006 TBC1D29Q9UFV1 150 aa2.54□□□□□ -2
DEPDC1B-204ENST00000509006 IPO11Q9UI26 975 aaKnown RBP2.54□□□□□ -2
DEPDC1B-204ENST00000509006 ICAM5Q9UMF0 924 aa2.54□□□□□ -2
DEPDC1B-204ENST00000509006 LAMP3Q9UQV4 416 aa2.54□□□□□ -2
DEPDC1B-204ENST00000509006 KNSTRNQ9Y448 316 aa2.54□□□□□ -2
DEPDC1B-204ENST00000509006 INSL5Q9Y5Q6 135 aa2.54□□□□□ -2
DEPDC1B-204ENST00000509006 RPS10-NUDT3A0A1W2PQS6 291 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 B9A039 149 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 H0Y3Z8 333 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 WDR46O15213 610 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 DHHO43323 396 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 PAPSS2O95340 614 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 LARGE1O95461 756 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 NTSR2O95665 410 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CGAP01215 116 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ACAA1P09110 424 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 HOXC6P09630 235 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 THEGLP0DJG4 465 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CSH1P0DML2 217 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CSH2P0DML3 217 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 SRGAP2BP0DMP2 458 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 NR2F1P10589 423 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 LAMP2P13473 410 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ALADP13716 330 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 GLULP15104 373 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 PORP16435 677 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 DESP17661 470 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 SAT1P21673 171 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 MMP8P22894 467 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 SLC8A1P32418 973 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 KIF5BP33176 963 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 GRK5P34947 590 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 PSMB10P40306 273 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 TNNT3P45378 269 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ENTPD1P49961 510 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CCR5P51681 352 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 TPD52P55327 224 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 PRAMEP78395 509 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 TMF1P82094 1093 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 MC1RQ01726 317 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CREB5Q02930 508 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 Q0VFX4 171 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 LRMPQ12912 555 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 BFSP1Q12934 665 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 STK4Q13043 487 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 AIMP2Q13155 320 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 SEMA3BQ13214 749 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 BFSP2Q13515 415 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 BECN1Q14457 450 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CRYMQ14894 314 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ANXA2RQ3ZCQ2 193 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 RRAGBQ5VZM2 374 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CPLX2Q6PUV4 134 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CRTC1Q6UUV9 634 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 KIAA0408Q6ZU52 694 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 GPSM1Q86YR5 675 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 BRSK2Q8IWQ3 736 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 PAQR4Q8N4S7 273 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 SRBD1Q8N5C6 995 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF713Q8N859 430 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 NFKBIDQ8NI38 313 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 LMO3Q8TAP4 145 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 RUFY2Q8WXA3 655 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 FAM120BQ96EK7 910 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 JAKMIP1Q96N16 626 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 GBP5Q96PP8 586 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 RAB3IPQ96QF0 476 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF347Q96SE7 839 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 REEP2Q9BRK0 252 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CENPOQ9BU64 300 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 HTATIP2Q9BUP3 242 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ELOVL1Q9BW60 279 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 AGXT2Q9BYV1 514 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 PCDHAC1Q9H158 963 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 SIL1Q9H173 461 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 OR10A4Q9H209 315 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ABHD16BQ9H3Z7 469 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 TASP1Q9H6P5 420 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CHODLQ9H9P2 273 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF556Q9HAH1 456 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 XAB2Q9HCS7 855 aaKnown RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 CCDC177Q9NQR7 707 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 G6PC2Q9NQR9 355 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 HCFC1R1Q9NWW0 138 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 IGSF9Q9P2J2 1179 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 GTF3C4Q9UKN8 822 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF215Q9UL58 517 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ZMYND8Q9ULU4 1186 aaPredicted RBP2.53□□□□□ -2
DEPDC1B-204ENST00000509006 B3GNT3Q9Y2A9 372 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 ZNF711Q9Y462 761 aa2.53□□□□□ -2
DEPDC1B-204ENST00000509006 A0A1B0GUV1 79 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 TTC36A6NLP5 189 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 E7EVH7 732 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 PTGES3LE9PB15 166 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 RHODO00212 210 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 VILLO15195 856 aa2.52□□□□□ -2.01
DEPDC1B-204ENST00000509006 HNRNPRO43390 633 aaKnown RBP2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms