RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 FAM107AO95990 144 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FYNP06241 537 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SLFN14P0C7P3 912 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ALAS2P22557 587 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NOS3P29474 1203 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NTSR1P30989 418 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SOAT1P35610 550 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ASMTP46597 345 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RGS19P49795 217 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CDH6P55285 790 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SF3A3Q12874 501 aaKnown RBP eCLIP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 BNIP1Q12981 228 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MRPL28Q13084 256 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SLC14A2Q15849 920 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TANGO2Q6ICL3 276 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZNF544Q6NX49 715 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 B4GALNT4Q76KP1 1039 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MRPL10Q7Z7H8 261 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZBTB46Q86UZ6 589 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 LSMEM2Q8N112 164 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SMG8Q8ND04 991 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 UHMK1Q8TAS1 419 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KAT2BQ92831 832 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DNASE1L2Q92874 299 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TTC17Q96AE7 1141 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ZC3H10Q96K80 434 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 DUSP23Q9BVJ7 150 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TRIT1Q9H3H1 467 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MCCC2Q9HCC0 563 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SYBUQ9NX95 663 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 UBAP1Q9NZ09 502 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 UBA2Q9UBT2 640 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 EFR3BQ9Y2G0 817 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RAD54BQ9Y620 910 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MYH15Q9Y2K3 1946 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PVALEFA0A1B0GWK0 134 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C9J4A7 227 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 F8VP50 259 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 H3BUI4 141 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NDUFAB1O14561 156 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NPC1O15118 1278 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KLHL41O60662 606 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RAMP2O60895 175 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HAPLN1P10915 354 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TCP1P17987 556 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PRKAR1BP31321 381 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PRCPP42785 496 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CTSOP43234 321 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 RPL21P46778 160 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 COPS2P61201 443 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ECT2LQ008S8 904 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 GHRHRQ02643 423 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CNTN1Q12860 1018 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HNRNPDQ14103 355 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CYP2A13Q16696 494 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 FBXO43Q4G163 708 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 HDXQ7Z353 690 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ATCAYQ86WG3 371 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TMEM126BQ8IUX1 230 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MFSD6LQ8IWD5 586 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PIP4K2CQ8TBX8 421 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 OVCA2Q8WZ82 227 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 COL26A1Q96A83 441 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 BORCS6Q96GS4 357 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CABS1Q96KC9 395 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 MYADMQ96S97 322 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 LRFN3Q9BTN0 628 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TRIM15Q9C019 465 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 VPS11Q9H270 941 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 NT5MQ9NPB1 228 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PAPOLBQ9NRJ5 636 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 KCNK4Q9NYG8 393 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 EDARQ9UNE0 448 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PLAAQ9Y263 795 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PCDHGA2Q9Y5H1 932 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SAR1BQ9Y6B6 198 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CAPN7Q9Y6W3 813 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CEP290O15078 2479 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SIPA1L1O43166 1804 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ABCA4P78363 2273 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ARID2Q68CP9 1835 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 WDR27A2RRH5 827 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 USP27XA6NNY8 438 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 F8W810 466 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 BCAT2O15382 392 aaPredicted RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TMCC2O75069 709 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 USP1O94782 785 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 STBD1O95210 358 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 ECEL1O95672 775 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CSKP41240 450 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PDX1P52945 283 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SLC16A1P53985 500 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 PPARDQ03181 441 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C5orf22Q49AR2 442 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SPDYCQ5MJ68 293 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 TXNDC8Q6A555 127 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CENPPQ6IPU0 288 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 CXorf57Q6NSI4 855 aaKnown RBP2.99□□□□□ -1.93
NEDD4-208ENST00000508342 SYT10Q6XYQ8 523 aa2.99□□□□□ -1.93
NEDD4-208ENST00000508342 C15orf39Q6ZRI6 1047 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms