RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 HSPA9P38646 679 aaKnown RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 MMP13P45452 471 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 RENBPP51606 427 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 HNRNPDQ14103 355 aaKnown RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 ELAVL3Q14576 367 aaKnown RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 CARD16Q5EG05 197 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 ATXN7L2Q5T6C5 722 aaPredicted RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 C9orf64Q5T6V5 341 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 HEATR6Q6AI08 1181 aaKnown RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 DARS2Q6PI48 645 aaKnown RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 DSG4Q86SJ6 1040 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 ZNF605Q86T29 641 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 STK40Q8N2I9 435 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 OR2AP1Q8NGE2 309 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 OR2T3Q8NH03 318 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 GAB3Q8WWW8 586 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 ATG4AQ8WYN0 398 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 FATE1Q969F0 183 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 ZC3H10Q96K80 434 aaKnown RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 EXOC2Q96KP1 924 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 CAPZA3Q96KX2 299 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 FRMD8P1Q9BZ68 369 aaPredicted RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 FBRSQ9HAH7 460 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 NT5MQ9NPB1 228 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 RBM22Q9NW64 420 aaKnown RBP eCLIP10.17□□□□□ -0.78
NUP54-203ENST00000504173 BCCIPQ9P287 314 aaKnown RBP eCLIP10.17□□□□□ -0.78
NUP54-203ENST00000504173 HECAQ9UBI9 543 aaPredicted RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 LHX3Q9UBR4 397 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 TTC7AQ9ULT0 858 aaPredicted RBP10.17□□□□□ -0.78
NUP54-203ENST00000504173 TTLL3Q9Y4R7 772 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 MYO9AB2RTY4 2548 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 CKAP5Q14008 2032 aa10.17□□□□□ -0.78
NUP54-203ENST00000504173 J3QKU1 62 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 MTSS1O43312 755 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 RNASEH1O60930 286 aaKnown RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 ZNF821O75541 412 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 ZNF189O75820 626 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 TRIM16O95361 564 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 JCHAINP01591 159 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 TUBB4AP04350 444 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 RBL1P28749 1068 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 CCNHP51946 323 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 MAXP61244 160 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 IFI35P80217 286 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 RAD51Q06609 339 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 ITKQ08881 620 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 ZBTB17Q13105 803 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 SIX1Q15475 284 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 ZNF776Q68DI1 518 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 TCEAL6Q6IPX3 200 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 ANO7Q6IWH7 933 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 KIAA1324Q6UXG2 1013 aaKnown RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 DPY19L3Q6ZPD9 716 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 CACUL1Q86Y37 369 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 PLPP6Q8IY26 295 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 PGBD3Q8N328 593 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 CAMKK1Q8N5S9 505 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 TEX26Q8N6G2 289 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 TSEN2Q8NCE0 465 aaKnown RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 CHST14Q8NCH0 376 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 OR2A12Q8NGT7 310 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 OR6K2Q8NGY2 324 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 SLC35B2Q8TB61 432 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 ACTRT1Q8TDG2 376 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 HMGB4Q8WW32 186 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 C1orf54Q8WWF1 131 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 HTR3CQ8WXA8 447 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 ZNF592Q92610 1267 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 TCEAL3Q969E4 200 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 LRIG1Q96JA1 1093 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 PSKH2Q96QS6 385 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 IL12RB2Q99665 862 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 MGME1Q9BQP7 344 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 HEPHQ9BQS7 1158 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 CEP41Q9BYV8 373 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 SMOC1Q9H4F8 434 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 ZDHHC6Q9H6R6 413 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 C10orf88Q9H8K7 445 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 CD248Q9HCU0 757 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 SMARCAL1Q9NZC9 954 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 IL36AQ9UHA7 158 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 EVLQ9UI08 416 aaPredicted RBP10.16□□□□□ -0.78
NUP54-203ENST00000504173 DNPEPQ9ULA0 475 aa10.16□□□□□ -0.78
NUP54-203ENST00000504173 CCDC163A0A0D9SF12 145 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 GOLGA6L10A0A0M3HER8 536 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 BCLAF3A2AJT9 711 aaKnown RBP10.15□□□□□ -0.78
NUP54-203ENST00000504173 C1QTNF3-AMACRE9PGA6 284 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 RNF103O00237 685 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 KRIT1O00522 736 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 MUSKO15146 869 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 ALOX15BO15296 676 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 KCNN4O15554 427 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 LIASO43766 372 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 STK10O94804 968 aaKnown RBP10.15□□□□□ -0.78
NUP54-203ENST00000504173 POP4O95707 220 aaKnown RBP10.15□□□□□ -0.78
NUP54-203ENST00000504173 IL1BP01584 269 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 PRNPP04156 253 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 HLA-DQB2P05538 268 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 GABRG2P18507 467 aa10.15□□□□□ -0.78
NUP54-203ENST00000504173 NDUFV2P19404 249 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms