RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 DLDP09622 509 aaKnown RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 ATF6P18850 670 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 CCNHP51946 323 aaPredicted RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 ATN1P54259 1190 aaPredicted RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 KCNJ2P63252 427 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 ELF3P78545 371 aaPredicted RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 OCRLQ01968 901 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 HNRNPDQ14103 355 aaKnown RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 FASTKD1Q53R41 847 aaKnown RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 SPDYAQ5MJ70 313 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 FSTL4Q6MZW2 842 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 ASRGL1Q7L266 308 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 CMC1Q7Z7K0 106 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 CCDC117Q8IWD4 279 aaPredicted RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 LINC00469Q8N7U9 141 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 FBXO22Q8NEZ5 403 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 ATXN7L3BQ96GX2 97 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 MRGPRX2Q96LB1 330 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 MCMBPQ9BTE3 642 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 TTLL2Q9BWV7 592 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 TMEM120AQ9BXJ8 343 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 UBE2OQ9C0C9 1292 aaKnown RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 SLC25A51Q9H1U9 297 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 SAGE1Q9NXZ1 904 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 ZFP69BQ9UJL9 534 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 MTO1Q9Y2Z2 717 aaKnown RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 SPO11Q9Y5K1 396 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 FNDC1Q4ZHG4 1894 aaPredicted RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 TANC1Q9C0D5 1861 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 CCDC78A2IDD5 438 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 J3KR12 359 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 TLR5O60602 858 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 SNNO75324 88 aaPredicted RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 EFEMP2O95967 443 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 PROCP04070 461 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 PRKCGP05129 697 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 RENBPP51606 427 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 STX3Q13277 289 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 POU6F1Q14863 301 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 SMUG1Q53HV7 270 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 POTEHQ6S545 545 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 KDELC1Q6UW63 502 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
USP46-204ENST00000503060 SP110Q9HB58 689 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 NT5MQ9NPB1 228 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 NSMCE4AQ9NXX6 385 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 MTRRQ9UBK8 725 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 ZNF212Q9UDV6 495 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 TRIM33Q9UPN9 1127 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 DOCK4Q8N1I0 1966 aa11.7□□□□□ -0.54
USP46-204ENST00000503060 GOLGA8TH3BQL2 631 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 MPOP05164 745 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 PYGLP06737 847 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 RPSAP08865 295 aaKnown RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 ABCG1P45844 678 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 KPNA1P52294 538 aaPredicted RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 WNT3AP56704 352 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 TAF1BQ53T94 588 aaPredicted RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 SLC8B1Q6J4K2 584 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 RANBP10Q6VN20 620 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 BTN2A1Q7KYR7 527 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 DEFB128Q7Z7B8 93 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 KIF2BQ8N4N8 673 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 MIPOL1Q8TD10 442 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 PTCD2Q8WV60 388 aaKnown RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 RPRD1AQ96P16 312 aaPredicted RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 FSD1LQ9BXM9 530 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 TRIM8Q9BZR9 551 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 ZNF395Q9H8N7 513 aaPredicted RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 MRM3Q9HC36 420 aaKnown RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 ARHGEF3Q9NR81 526 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 TMEM216Q9P0N5 145 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 HEY2Q9UBP5 337 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 TCAF1Q9Y4C2 921 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 NUMBLQ9Y6R0 609 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 CEP350Q5VT06 3117 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 GPR37O15354 613 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 KDM1AO60341 852 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 UPP2O95045 317 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 PAHP00439 452 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 MYL2P10916 166 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 GMPRP36959 345 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 USP41Q3LFD5 358 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 MARC1Q5VT66 337 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 MBLAC2Q68D91 279 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 NADSYN1Q6IA69 706 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.69□□□□□ -0.54
USP46-204ENST00000503060 ZCCHC23Q6ZST2 131 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 ANKRD33Q7Z3H0 272 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 PPP1R14CQ8TAE6 165 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 IMP4Q96G21 291 aaKnown RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 VPS39Q96JC1 886 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 KLHL5Q96PQ7 755 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 TGIF2Q9GZN2 237 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 VCX3BQ9H321 246 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 PRELID1Q9Y255 219 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 HBS1LQ9Y450 684 aaKnown RBP11.69□□□□□ -0.54
USP46-204ENST00000503060 BACE2Q9Y5Z0 518 aa11.69□□□□□ -0.54
USP46-204ENST00000503060 E2F8A0AVK6 867 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms