RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 ZDHHC5Q9C0B5 715 aa10.85□□□□□ -0.67
UBE2D3-212ENST00000502563 ZDHHC6Q9H6R6 413 aa10.85□□□□□ -0.67
UBE2D3-212ENST00000502563 KCND1Q9NSA2 647 aa10.85□□□□□ -0.67
UBE2D3-212ENST00000502563 RPL26L1Q9UNX3 145 aaKnown RBP10.85□□□□□ -0.67
UBE2D3-212ENST00000502563 FADS3Q9Y5Q0 445 aa10.85□□□□□ -0.67
UBE2D3-212ENST00000502563 CEP192Q8TEP8 1941 aa10.85□□□□□ -0.67
UBE2D3-212ENST00000502563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 A0A1B0GTW7 788 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 C16orf96A6NNT2 1141 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 KRIT1O00522 736 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 TOR1BO14657 336 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 MUSKO15146 869 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 INSIG1O15503 277 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 FZD6O60353 706 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 SERPINF2P08697 491 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 PYGMP11217 842 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 CA4P22748 312 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 MSNP26038 577 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 RGRP47804 291 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 GRIA4P48058 902 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 DHPSP49366 369 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 NUMBP49757 651 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 DNA2P51530 1060 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 EMP3P54852 163 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 RACK1P63244 317 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 ARHGAP8P85298 464 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 LMNB2Q03252 620 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 BCL2L1Q07817 233 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 UGP2Q16851 508 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 TMEM259Q4ZIN3 620 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 TEX44Q53QW1 395 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 ATXN7L2Q5T6C5 722 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 DCAF12L1Q5VU92 463 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 FBXL19Q6PCT2 694 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 PARS2Q7L3T8 475 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 CCDC50Q8IVM0 306 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 TMEFF1Q8IYR6 380 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 DENND6BQ8NEG7 585 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 OR14C36Q8NHC7 312 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 GRIN3AQ8TCU5 1115 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 TFB1MQ8WVM0 346 aaKnown RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 TADA1Q96BN2 335 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 BIRC7Q96CA5 298 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 HAUS1Q96CS2 278 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 LENG8Q96PV6 779 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 FERMT1Q9BQL6 677 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 KCNF1Q9H3M0 494 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 C6orf106Q9H6K1 298 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 CAPN10Q9HC96 672 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 SEMA4GQ9NTN9 838 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 KCTD5Q9NXV2 234 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 DNPEPQ9ULA0 475 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 ZKSCAN5Q9Y2L8 839 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 HEY1Q9Y5J3 304 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 ZFHX2Q9C0A1 2572 aaPredicted RBP10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 NUMA1Q14980 2115 aa10.84□□□□□ -0.67
UBE2D3-212ENST00000502563 MEI4A8MW99 385 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 BNIP3LO60238 219 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 FTCDO95954 541 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 UGT2B4P06133 528 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 KRT10P13645 584 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 SDHBP21912 280 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 ITPKAP23677 461 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 SCNN1BP51168 640 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 AFF3P51826 1226 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 METAP1P53582 386 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 RPS21P63220 83 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 CREB5Q02930 508 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 ADCY2Q08462 1091 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 TMEM52BQ4KMG9 183 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 SETMARQ53H47 684 aaPredicted RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 SLC45A4Q5BKX6 768 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 PRR23CQ6ZRP0 262 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 PRPF39Q86UA1 669 aaKnown RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 HORMAD1Q86X24 394 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 CACUL1Q86Y37 369 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 PGBD5Q8N414 524 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 TMEM145Q8NBT3 493 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 CCNYQ8ND76 341 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 ARRDC2Q8TBH0 407 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 GANCQ8TET4 914 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 FEM1CQ96JP0 617 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 TEKT5Q96M29 485 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 KLHL32Q96NJ5 620 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 PPP1R2P1Q96PQ5 205 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 QKIQ96PU8 341 aaKnown RBP eCLIP10.83□□□□□ -0.685e-10■■■□□ 18.8
UBE2D3-212ENST00000502563 MCCC1Q96RQ3 725 aaPredicted RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 LYSMD1Q96S90 227 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 LGMNQ99538 433 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 ARRDC1-AS1Q9H2J1 176 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 RBM22Q9NW64 420 aaKnown RBP eCLIP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 TRHDEQ9UKU6 1024 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 PHTF1Q9UMS5 762 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 INVSQ9Y283 1065 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 JRKLQ9Y4A0 524 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 ZNF292O60281 2723 aa10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 PTPRZ1P23471 2315 aaPredicted RBP10.83□□□□□ -0.68
UBE2D3-212ENST00000502563 TBC1D3DA0A087WVF3 549 aa10.82□□□□□ -0.68
UBE2D3-212ENST00000502563 TBC1D3IA0A087WXS9 549 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms