RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 EIF4A3P38919 411 aaKnown RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 GABRB2P47870 512 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 CSRP3P50461 194 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 YPEL5P62699 121 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 NFKB2Q00653 900 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 PPARDQ03181 441 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 RAB6CQ53S08 254 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 ATXN7L2Q5T6C5 722 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 NYAP1Q6ZVC0 841 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 RAB11FIP2Q7L804 512 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 JAMLQ86YT9 394 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 SDR16C5Q8N3Y7 309 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 FBXO39Q8N4B4 442 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 ARL10Q8N8L6 244 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 TP53I13Q8NBR0 393 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 TMEM35BQ8NCS4 154 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 OR2AP1Q8NGE2 309 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 EXTL1Q92935 676 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 ARHGEF2Q92974 986 aaKnown RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 C18orf8Q96DM3 657 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 ARHGEF26Q96DR7 871 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 EPAS1Q99814 870 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 FAM117AQ9C073 453 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 RAB6CQ9H0N0 254 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 PPARGC1AQ9UBK2 798 aaKnown RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 DNAJC12Q9UKB3 198 aa14.9□□□□□ -0.02
TRAF4-212ENST00000498540 HEMK1Q9Y5R4 338 aaPredicted RBP14.9□□□□□ -0.02
TRAF4-212ENST00000498540 TLN1Q9Y490 2541 aaKnown RBP14.89□□□□□ -0.03
TRAF4-212ENST00000498540 A0A1W2PQM1 296 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 GTPBP10A4D1E9 387 aaKnown RBP14.89□□□□□ -0.03
TRAF4-212ENST00000498540 GOLGA8SH3BPF8 625 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 FGFR1OPO95684 399 aaKnown RBP14.89□□□□□ -0.03
TRAF4-212ENST00000498540 GSRP00390 522 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 CCL7P80098 99 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 IRF4Q15306 451 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 MYLK3Q32MK0 819 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 USP53Q70EK8 1073 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 NLRP14Q86W24 1093 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 FAM71AQ8IYT1 594 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 SGF29Q96ES7 293 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 GFM1Q96RP9 751 aaKnown RBP14.89□□□□□ -0.03
TRAF4-212ENST00000498540 WRAP53Q9BUR4 548 aaKnown RBP14.89□□□□□ -0.03
TRAF4-212ENST00000498540 IL17BQ9UHF5 180 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 DNAI1Q9UI46 699 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 TMEM59LQ9UK28 342 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 ACSL6Q9UKU0 697 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 DOLKQ9UPQ8 538 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 NEU3Q9UQ49 428 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 ANKRD36A6QL64 1941 aa14.89□□□□□ -0.03
TRAF4-212ENST00000498540 CXorf51AA0A1B0GTR3 108 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 TERTO14746 1132 aaKnown RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 TM7SF2O76062 418 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 GJB6O95452 261 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 POP4O95707 220 aaKnown RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 RPLP0P05388 317 aaKnown RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 HK3P52790 923 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 INHBCP55103 352 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 SNRPD1P62314 119 aaKnown RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 EIF3IQ13347 325 aaKnown RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 POLD3Q15054 466 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 ALG11Q2TAA5 492 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 KLHL40Q2TBA0 621 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 MANEALQ5VSG8 457 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 GDPD4Q6W3E5 623 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 TTC7BQ86TV6 843 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 IRF2BP1Q8IU81 584 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 HID1Q8IV36 788 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 FSTL5Q8N475 847 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 NETO2Q8NC67 525 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 CXorf40AQ8TE69 158 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 TSACCQ96A04 125 aaPredicted RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 C1QTNF7Q9BXJ2 289 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 OSBPL1AQ9BXW6 950 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 CPEB1Q9BZB8 566 aaKnown RBP14.88□□□□□ -0.03
TRAF4-212ENST00000498540 STRADBQ9C0K7 418 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 PDCL3Q9H2J4 239 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 STARD5Q9NSY2 213 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 PISDQ9UG56 409 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 COQ6Q9Y2Z9 468 aa14.88□□□□□ -0.03
TRAF4-212ENST00000498540 UNC13CQ8NB66 2214 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 FAM72CH0Y354 149 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 AGRPO00253 132 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 ALPIP09923 528 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 FAM87AP0C7U9 286 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 CYP11B1P15538 503 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 ITGB6P18564 788 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 CCKBRP32239 447 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 ETFBP38117 255 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 MAPKAPK2P49137 400 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 GEMIN4P57678 1058 aaKnown RBP14.87□□□□□ -0.03
TRAF4-212ENST00000498540 ATP11AP98196 1134 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 ELOCQ15369 112 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 FAM72AQ5TYM5 149 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 TAF3Q5VWG9 929 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 KCTD16Q68DU8 428 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 FAM72DQ6L9T8 149 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 RWDD4Q6NW29 188 aaKnown RBP14.87□□□□□ -0.03
TRAF4-212ENST00000498540 FAM72BQ86X60 149 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 EMC1Q8N766 993 aa14.87□□□□□ -0.03
TRAF4-212ENST00000498540 ARHGAP9Q9BRR9 750 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms