RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 SLC1A5Q15758 541 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF77Q15935 545 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ZSCAN26Q16670 478 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 PRRC2BQ5JSZ5 2229 aaKnown RBP8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 SIRPB2Q5JXA9 342 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 PRSS36Q5K4E3 855 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF697Q5TEC3 545 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 MROH9Q5TGP6 573 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 DENND5AQ6IQ26 1287 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 PKN3Q6P5Z2 889 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 LVRNQ6Q4G3 990 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 LINGO4Q6UY18 593 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 TPGS1Q6ZTW0 290 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 HTR3DQ70Z44 454 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 CYS1Q717R9 158 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 KDELC2Q7Z4H8 507 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ADGRD2Q7Z7M1 963 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 CMTM8Q8IZV2 173 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 OTUD6BQ8N6M0 293 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 BANPQ8N9N5 519 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ING5Q8WYH8 240 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 TADA1Q96BN2 335 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 TMA16Q96EY4 203 aaKnown RBP8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ATXN7L3BQ96GX2 97 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 MAGEB18Q96M61 343 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 PSKH2Q96QS6 385 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 RANBP9Q96S59 729 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 RBBP8Q99708 897 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 C2orf49Q9BVC5 232 aaPredicted RBP8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC46A2Q9BY10 475 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 NKX2-4Q9H2Z4 354 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 SFXN1Q9H9B4 322 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 CERS4Q9HA82 394 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 PIDD1Q9HB75 910 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 CHRAC1Q9NRG0 131 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 IARS2Q9NSE4 1012 aaKnown RBP8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 DNMT3BQ9UBC3 853 aaKnown RBP8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 LHX3Q9UBR4 397 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ZMYM5Q9UJ78 669 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 CCL26Q9Y258 94 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 HCFC2Q9Y5Z7 792 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 PSAT1Q9Y617 370 aa8.16□□□□□ -1.1
PDZRN3-212ENST00000498048 ZFC3H1O60293 1989 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF197O14709 1029 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 PER2O15055 1255 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 INSIG1O15503 277 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 TIMM44O43615 452 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 GLRA3O75311 464 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 MOSPD3O75425 235 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 ASMTLO95671 621 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 NDST3O95803 873 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC4A1P02730 911 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 VIMP08670 466 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 COL9A1P20849 921 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SPRP35270 261 aaPredicted RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 PBX2P40425 430 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 CCT5P48643 541 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 WDR4P57081 412 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC18A2Q05940 514 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 CDK18Q07002 472 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 LMAN2Q12907 356 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 THOC5Q13769 683 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 MPP2Q14168 576 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 RAB30Q15771 203 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 UGP2Q16851 508 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 HSP90AA5PQ58FG0 334 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 FSCBQ5H9T9 825 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 GRTP1Q5TC63 336 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF470Q6ECI4 717 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 RANBP10Q6VN20 620 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 GRASPQ7Z6J2 395 aaPredicted RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 STRA8Q7Z7C7 330 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 RBM23Q86U06 439 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 RNF135Q8IUD6 432 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 LPCAT1Q8NF37 534 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 GABPB2Q8TAK5 448 aaPredicted RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 BLOC1S5Q8TDH9 187 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 TCP10LQ8TDR4 215 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 LRRC8CQ8TDW0 803 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 CKAP2Q8WWK9 683 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SMG7Q92540 1137 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 USP13Q92995 863 aaPredicted RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 MYO19Q96H55 970 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 VPS39Q96JC1 886 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 ZNF778Q96MU6 729 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 FAM111AQ96PZ2 611 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 HS3ST6Q96QI5 342 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 NUDCD1Q96RS6 583 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SRPK1Q96SB4 655 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 TDRD1Q9BXT4 1180 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 LMAN2LQ9H0V9 348 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 ARNT2Q9HBZ2 717 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 TREX1Q9NSU2 369 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 PLK2Q9NYY3 685 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SLC17A7Q9P2U7 560 aa8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 FCF1Q9Y324 198 aaKnown RBP8.15□□□□□ -1.1
PDZRN3-212ENST00000498048 SOBPA7XYQ1 873 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 TCP11X1B4DZS4 312 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 NEDD8-MDP1E9PL57 170 aa8.14□□□□□ -1.11
PDZRN3-212ENST00000498048 GOLGA8TH3BQL2 631 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms