RNA–Protein interactions for RNA: ENST00000497677.5

CTDSP1-214, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 998 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-214ENST00000497677 OPHN1O60890 802 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 RNGTTO60942 597 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 ATP1A1P05023 1023 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 CSRP1P21291 193 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 MAT2AP31153 395 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 MAN1A1P33908 653 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 CTSKP43235 329 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 NEK3P51956 506 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 CDH6P55285 790 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 RHOAP61586 193 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 SLC14A1Q13336 389 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 RPS6KA1Q15418 735 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 TEAD4Q15561 434 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 HADHQ16836 314 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 ZNF284Q2VY69 593 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 IL27RAQ6UWB1 636 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 PRPF39Q86UA1 669 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 HORMAD1Q86X24 394 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 PPP1R16AQ96I34 528 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 SERAC1Q96JX3 654 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 GDAP1L1Q96MZ0 367 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 GAREM1Q9H706 876 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 IPO11Q9UI26 975 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 AMFRQ9UKV5 643 aa16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 FNDC3AQ9Y2H6 1198 aaKnown RBP16.18■□□□□ 0.18
CTDSP1-214ENST00000497677 NCOR2Q9Y618 2525 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 ASCC3Q8N3C0 2202 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 A0A1W2PQU0 124 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 DFFAO00273 331 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 ENC1O14682 589 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 SPINT1O43278 529 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 AP1G1O43747 822 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 BUB1BO60566 1050 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 PEX11BO96011 259 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 UGT2B4P06133 528 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 NUDT1P36639 197 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 ABL2P42684 1182 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 SLC1A1P43005 524 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 SSR1P43307 286 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 RGRP47804 291 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 IL10RBQ08334 325 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 DPYSL3Q14195 570 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 TMEM259Q4ZIN3 620 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 TMCO3Q6UWJ1 677 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 GDPD4Q6W3E5 623 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 DBX2Q6ZNG2 339 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 PBKQ96KB5 322 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 KLHL32Q96NJ5 620 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 TLR10Q9BXR5 811 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 CPEB1Q9BZB8 566 aaKnown RBP16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 RCOR3Q9P2K3 495 aaPredicted RBP16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 DMTF1Q9Y222 760 aa16.17■□□□□ 0.18
CTDSP1-214ENST00000497677 EFCAB8A8MWE9 144 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 KCNK3O14649 394 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 AREL1O15033 823 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 MUSKO15146 869 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 CTIFO43310 598 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 IGSF6O95976 241 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 ZNF883P0CG24 379 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 CD38P28907 300 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 CSNK1DP48730 415 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 FGL2Q14314 439 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 MESDQ14696 234 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 SEL1L3Q68CR1 1132 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 NAPEPLDQ6IQ20 393 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 PSAPL1Q6NUJ1 521 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 FBXL19Q6PCT2 694 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 TMEM145Q8NBT3 493 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 TSEN2Q8NCE0 465 aaKnown RBP16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 DEFB124Q8NES8 71 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 PCDH19Q8TAB3 1148 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 RAB7BQ96AH8 199 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 FAF2Q96CS3 445 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 EXOC2Q96KP1 924 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 NSMCE3Q96MG7 304 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 OSBPL9Q96SU4 736 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 AASDHPPTQ9NRN7 309 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 DKK3Q9UBP4 350 aa16.16■□□□□ 0.18
CTDSP1-214ENST00000497677 TMEM110-MUSTN1A8MSY1 372 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 SLC31A1O15431 190 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 MAFKO60675 156 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 PCDH8O95206 1070 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 CER1O95813 267 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 FTCDO95954 541 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 KRT7P08729 469 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 CEACAM1P13688 526 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 TIMP2P16035 220 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 PAFAH1B1P43034 410 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 NOVA1P51513 510 aaKnown RBP16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 RAD51Q06609 339 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 SLC10A7Q0GE19 358 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 KRT81Q14533 505 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 RFTN1Q14699 578 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 PDK2Q15119 407 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 ZNF423Q2M1K9 1284 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 N4BP2L1Q5TBK1 243 aaPredicted RBP16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 NT5DC3Q86UY8 548 aa16.15■□□□□ 0.18
CTDSP1-214ENST00000497677 UBL4BQ8N7F7 174 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms