RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 SHROOM3Q8TF72 1996 aa11.61□□□□□ -0.55
HLA-B-254ENST00000497377 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 C16orf96A6NNT2 1141 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 PATE3B3GLJ2 98 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 PLK4O00444 970 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 APOL1O14791 398 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 ARHGAP6O43182 974 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 ZRANB2O95218 330 aaKnown RBP eCLIP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 PEX11BO96011 259 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 UGT2B4P06133 528 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 CCNCP24863 283 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 MAOBP27338 520 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 GRIA4P48058 902 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TAS2R38P59533 333 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 COPS2P61201 443 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 AP1S1P61966 158 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 RACK1P63244 317 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 HNRNPDQ14103 355 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TFDP2Q14188 446 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 ZNF235Q14590 738 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TAZQ16635 292 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 MARC1Q5VT66 337 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 SLC9A4Q6AI14 798 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TCEAL6Q6IPX3 200 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 BZW1Q7L1Q6 419 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 PARS2Q7L3T8 475 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 SRLQ86TD4 932 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TP53INP2Q8IXH6 220 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 RCOR2Q8IZ40 523 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 SYCE1Q8N0S2 351 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 ZCCHC9Q8N567 271 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 NETO2Q8NC67 525 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TSEN2Q8NCE0 465 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 KIAA1524Q8TCG1 905 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TCEAL3Q969E4 200 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 SKA1Q96BD8 255 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 HDAC11Q96DB2 347 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 RBM41Q96IZ5 413 aaKnown RBP11.6□□□□□ -0.55
HLA-B-254ENST00000497377 KLHL32Q96NJ5 620 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 TSGA10Q9BZW7 698 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 LACRTQ9GZZ8 138 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 BRD8Q9H0E9 1235 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 ATP13A3Q9H7F0 1226 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 AMACRQ9UHK6 382 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 SALL4Q9UJQ4 1053 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 HYOU1Q9Y4L1 999 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 DUSP10Q9Y6W6 482 aa11.6□□□□□ -0.55
HLA-B-254ENST00000497377 CEP250Q9BV73 2442 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.59□□□□□ -0.55
HLA-B-254ENST00000497377 A0A1W2PQ67 120 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TSPAN11A1L157 253 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 CCDC66A2RUB6 948 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 RNF103O00237 685 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 MATN3O15232 486 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TSPAN6O43657 245 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 RNGTTO60942 597 aaKnown RBP11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TNNT1P13805 278 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 ENGP17813 658 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 SERPINA4P29622 427 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 GKP32189 559 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 CDKN2BP42772 138 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 MMP13P45452 471 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 NR2C2P49116 596 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 ATXN3P54252 364 aaPredicted RBP11.59□□□□□ -0.55
HLA-B-254ENST00000497377 RPS21P63220 83 aaKnown RBP11.59□□□□□ -0.55
HLA-B-254ENST00000497377 SLC10A7Q0GE19 358 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 PDK1Q15118 436 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 SETMARQ53H47 684 aaPredicted RBP11.59□□□□□ -0.55
HLA-B-254ENST00000497377 SLC45A4Q5BKX6 768 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TFDP3Q5H9I0 405 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 CFAP58Q5T655 872 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 STPG1Q5TH74 334 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 KIAA1161Q6NSJ0 714 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 BRAT1Q6PJG6 821 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 IL27RAQ6UWB1 636 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 HORMAD1Q86X24 394 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 RFX6Q8HWS3 928 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 LRRC8AQ8IWT6 810 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 RNF10Q8N5U6 811 aaKnown RBP11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TEX26Q8N6G2 289 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 PLD5Q8N7P1 536 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 EXD1Q8NHP7 514 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 MAML1Q92585 1016 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 VOPP1Q96AW1 172 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 FEM1CQ96JP0 617 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 EXOC2Q96KP1 924 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 NUDCD1Q96RS6 583 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 MGME1Q9BQP7 344 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 ORAI3Q9BRQ5 295 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 RTKNQ9BST9 563 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 GOLPH3Q9H4A6 298 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 SUV39H2Q9H5I1 410 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TM9SF3Q9HD45 589 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 TMEM9BQ9NQ34 198 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 DTLQ9NZJ0 730 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 PCDHA3Q9Y5H8 950 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 FADS3Q9Y5Q0 445 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 ADGRG1Q9Y653 693 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 PCDH15Q96QU1 1955 aa11.59□□□□□ -0.55
HLA-B-254ENST00000497377 ANKRD36A6QL64 1941 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms