RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, human

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-233	ENST00000495899	KIAA1161	Q6NSJ0	714 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	ARHGAP36	Q6ZRI8	547 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	PARS2	Q7L3T8	475 aa	Known RBP	12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	SRL	Q86TD4	932 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	TTC7B	Q86TV6	843 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	HORMAD1	Q86X24	394 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	TP53INP2	Q8IXH6	220 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	BBS5	Q8N3I7	341 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	MINDY1	Q8N5J2	469 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	ATPAF2	Q8N5M1	289 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	TSEN2	Q8NCE0	465 aa	Known RBP	12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	NSMCE1	Q8WV22	266 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	RAPGEF5	Q92565	580 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	FATE1	Q969F0	183 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	CCDC97	Q96F63	343 aa	Predicted RBP	12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	SERAC1	Q96JX3	654 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	KLHL32	Q96NJ5	620 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	RNF157	Q96PX1	679 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	SUV39H2	Q9H5I1	410 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	ANKRD6	Q9Y2G4	727 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	FADS3	Q9Y5Q0	445 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	ALG6	Q9Y672	507 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	TNRC6B	Q9UPQ9	1833 aa	Known RBP	12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899	CHD5	Q8TDI0	1954 aa		12.52	□□□□□ -0.41
MRPL55-233	ENST00000495899		A0A1B0GVT2	93 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899		A0A1W2PQU0	124 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	LRRD1	A4D1F6	860 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	C3orf70	A6NLC5	250 aa	Predicted RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	AREL1	O15033	823 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	SPOP	O43791	374 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	GJB3	O75712	270 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	PCDH8	O95206	1070 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	CER1	O95813	267 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ZNF883	P0CG24	379 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ZFX	P17010	805 aa	Predicted RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	MX2	P20592	715 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	CD38	P28907	300 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	GARS	P41250	739 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	C21orf59	P57076	290 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	AP1S1	P61966	158 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	FOXK2	Q01167	660 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	BNC1	Q01954	994 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	SLC10A7	Q0GE19	358 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	HNRNPD	Q14103	355 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	KIF19	Q2TAC6	998 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ZNF284	Q2VY69	593 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	HLA-B	Q31612	363 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	TMEM259	Q4ZIN3	620 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ODF2	Q5BJF6	829 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	RALGPS1	Q5JS13	557 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	MARC1	Q5VT66	337 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	NCBP2-AS2	Q69YL0	99 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	TIGD7	Q6NT04	549 aa	Predicted RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	C11orf63	Q6NUN7	778 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	BRAT1	Q6PJG6	821 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	RAD9B	Q6WBX8	426 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ADAT2	Q7Z6V5	191 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	IQCH	Q86VS3	1027 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	TXLNB	Q8N3L3	684 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	PQLC3	Q8N755	202 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	MFSD2A	Q8NA29	543 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	NETO2	Q8NC67	525 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	FAM174A	Q8TBP5	190 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ASB12	Q8WXK4	309 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	TSGA13	Q96PP4	275 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	MAK16	Q9BXY0	300 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	ATP13A3	Q9H7F0	1226 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	FSCN3	Q9NQT6	498 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	AASDHPPT	Q9NRN7	309 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	KLHL11	Q9NVR0	708 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	SLCO1B1	Q9Y6L6	691 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	CEP250	Q9BV73	2442 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	SPTBN4	Q9H254	2564 aa		12.51	□□□□□ -0.41
MRPL55-233	ENST00000495899	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899		A0A1W2PR77	199 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	TSPAN11	A1L157	253 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	DCDC2B	A2VCK2	349 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	INSIG1	O15503	277 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	PSTPIP1	O43586	416 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	MAGEC1	O60732	1142 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	TIMP2	P16035	220 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	CSRP1	P21291	193 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	CCNC	P24863	283 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	SERPINA4	P29622	427 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	MAT2A	P31153	395 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	GSDMD	P57764	484 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	POLR2L	P62875	67 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	ZNF235	Q14590	738 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	STAT4	Q14765	748 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	IFI16	Q16666	785 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	UAP1L1	Q3KQV9	507 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	TMEM139	Q8IV31	216 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	TEX26	Q8N6G2	289 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	SPC24	Q8NBT2	197 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	EXOC2	Q96KP1	924 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	SLC6A18	Q96N87	628 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	C1QTNF2	Q9BXJ5	285 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	SLC17A9	Q9BYT1	436 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	GAREM1	Q9H706	876 aa		12.5	□□□□□ -0.41
MRPL55-233	ENST00000495899	HAUS2	Q9NVX0	235 aa		12.5	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms