RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 DESI2Q9BSY9 194 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 SUV39H2Q9H5I1 410 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 HAUS2Q9NVX0 235 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 DKK3Q9UBP4 350 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 SALL4Q9UJQ4 1053 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 DMTF1Q9Y222 760 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 ANKRD6Q9Y2G4 727 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 HEY1Q9Y5J3 304 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 FADS3Q9Y5Q0 445 aa16.12■□□□□ 0.17
LIME1-209ENST00000494776 DCDC2BA2VCK2 349 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 C3orf70A6NLC5 250 aaPredicted RBP16.11■□□□□ 0.17
LIME1-209ENST00000494776 PRAMEF26H0Y7S4 382 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 TSPAN6O43657 245 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 ZRANB2O95218 330 aaKnown RBP eCLIP16.11■□□□□ 0.17
LIME1-209ENST00000494776 CER1O95813 267 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 PRLRP16471 622 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 KCNA4P22459 653 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 CCNCP24863 283 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 ABL2P42684 1182 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 AP1S1P61966 158 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 DYNLT1P63172 113 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 GBE1Q04446 702 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 LRRC73Q5JTD7 316 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 SEL1L3Q68CR1 1132 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 KIAA1161Q6NSJ0 714 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 LAYNQ6UX15 382 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 CAMK1DQ8IU85 385 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 CCDC50Q8IVM0 306 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 OR2I1PQ8NGU4 316 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 KIAA1524Q8TCG1 905 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 HCAR2Q8TDS4 363 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 MYOCQ99972 504 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 LACRTQ9GZZ8 138 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 GAREM1Q9H706 876 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 SCUBE2Q9NQ36 999 aa16.11■□□□□ 0.17
LIME1-209ENST00000494776 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.1■□□□□ 0.17
LIME1-209ENST00000494776 MACROD2A1Z1Q3 448 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 GOLGA6L3A6NEY3 463 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 MUSKO15146 869 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 MATN3O15232 486 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 PJA2O43164 708 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 PEX11BO96011 259 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 TIMP2P16035 220 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 AKT2P31751 481 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 MAXP61244 160 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 SGCGQ13326 291 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 HNRNPDQ14103 355 aaKnown RBP16.1■□□□□ 0.17
LIME1-209ENST00000494776 TFDP2Q14188 446 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 KIF19Q2TAC6 998 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 ZNF284Q2VY69 593 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 HLA-BQ31612 363 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 KAZNQ674X7 775 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 SLC9A4Q6AI14 798 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 BRAT1Q6PJG6 821 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 MFSD7Q6UXD7 560 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 KATNAL2Q8IYT4 538 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 RCOR2Q8IZ40 523 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 CCDC112Q8NEF3 446 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 CXorf40AQ8TE69 158 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 GRPEL1Q9HAV7 217 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 NT5MQ9NPB1 228 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 DTLQ9NZJ0 730 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 ZFR2Q9UPR6 939 aaKnown RBP16.1■□□□□ 0.17
LIME1-209ENST00000494776 ITM2BQ9Y287 266 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 TTLL3Q9Y4R7 772 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 SNX11Q9Y5W9 270 aa16.1■□□□□ 0.17
LIME1-209ENST00000494776 TTC24A2A3L6 582 aaPredicted RBP16.09■□□□□ 0.17
LIME1-209ENST00000494776 C10orf142B7Z368 130 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 VILLO15195 856 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 NRDCO43847 1150 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 GJB3O75712 270 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 HNRNPA2B1P22626 353 aaKnown RBP16.09■□□□□ 0.17
LIME1-209ENST00000494776 CDKN2BP42772 138 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 SUOXP51687 545 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 POLR2LP62875 67 aaKnown RBP16.09■□□□□ 0.17
LIME1-209ENST00000494776 ELP6Q0PNE2 266 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 SLC10A2Q12908 348 aaPredicted RBP16.09■□□□□ 0.17
LIME1-209ENST00000494776 LLGL1Q15334 1064 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 UGP2Q16851 508 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 ERAP2Q6P179 960 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 SPOCD1Q6ZMY3 1216 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 ZSCAN30Q86W11 494 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 CCDC13Q8IYE1 715 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 PGBD5Q8N414 524 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 PLD5Q8N7P1 536 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 PDCD6IPQ8WUM4 868 aaKnown RBP16.09■□□□□ 0.17
LIME1-209ENST00000494776 LRRN4Q8WUT4 740 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 VOPP1Q96AW1 172 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 HDAC11Q96DB2 347 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 RBM41Q96IZ5 413 aaKnown RBP16.09■□□□□ 0.17
LIME1-209ENST00000494776 TSGA13Q96PP4 275 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 NUDCD1Q96RS6 583 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 MGME1Q9BQP7 344 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 SLC17A9Q9BYT1 436 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 RBM22Q9NW64 420 aaKnown RBP eCLIP16.09■□□□□ 0.17
LIME1-209ENST00000494776 GGT7Q9UJ14 662 aa16.09■□□□□ 0.17
LIME1-209ENST00000494776 IGLON5A6NGN9 336 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 UPK3BL1B0FP48 263 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 UPK3BL2E5RIL1 263 aa16.08■□□□□ 0.16
LIME1-209ENST00000494776 TLR4O00206 839 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms