RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 ARID3BQ8IVW6 561 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 LMNTD2Q8IXW0 634 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SRRM1Q8IYB3 904 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 BBS5Q8N3I7 341 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 PPM1NQ8N819 430 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 DNAAF3Q8N9W5 541 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 IPMKQ8NFU5 416 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 OR13J1Q8NGT2 312 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GPR150Q8NGU9 434 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 CDKL2Q92772 493 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 IRF7Q92985 503 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 MRPL38Q96DV4 380 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 CFAP36Q96G28 342 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SEMA3CQ99985 751 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 FICDQ9BVA6 458 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 C2orf49Q9BVC5 232 aaPredicted RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 TDRD1Q9BXT4 1180 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 VPS11Q9H270 941 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 TLE6Q9H808 572 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SFXN1Q9H9B4 322 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 UGT1A7Q9HAW7 530 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 UGT1A10Q9HAW8 530 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 UGT1A8Q9HAW9 530 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 NOD2Q9HC29 1040 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SPHK2Q9NRA0 654 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 DZANK1Q9NVP4 752 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 HAUS2Q9NVX0 235 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 NSMCE4AQ9NXX6 385 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GDE1Q9NZC3 331 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 LMCD1Q9NZU5 365 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 TBK1Q9UHD2 729 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 GGA2Q9UJY4 613 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 RPL26L1Q9UNX3 145 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 PSAT1Q9Y617 370 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 DOCK6Q96HP0 2047 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 SHROOM3Q8TF72 1996 aa6.86□□□□□ -1.31
MSH5-217ENST00000494458 HELZP42694 1942 aaKnown RBP6.86□□□□□ -1.31
MSH5-217ENST00000494458 TYW5A2RUC4 315 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 GMNCA6NCL1 334 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ANKRD66B4E2M5 251 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 WASH3PC4AMC7 463 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 TRIM49D1C9J1S8 452 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 F5H423 210 aaPredicted RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 H0Y626 953 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 H7C0S8 307 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 SLC9A3R1O14745 358 aaPredicted RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 HOXC11O43248 304 aaPredicted RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 ATP9BO43861 1147 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 SNAP91O60641 907 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 TMCC1O94876 653 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ZWINTO95229 277 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 WISP3O95389 354 aaPredicted RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 GLP2RO95838 553 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 FAM107AO95990 144 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 MT-CO1P00395 513 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 MT-ND3P03897 115 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ALDOAP04075 364 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 PRKCGP05129 697 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ITGA2BP08514 1039 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ERVK-10P10266 1014 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CEBPBP17676 345 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 KRT4P19013 534 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 HLA-FP30511 346 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 HADHAP40939 763 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CSKP41240 450 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CHRNA4P43681 627 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 LEPRP48357 1165 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 LIMK2P53671 638 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 AP1S1P61966 158 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 GNGT1P63211 74 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 NTHL1P78549 312 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ZNF235Q14590 738 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 TMED2Q15363 201 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 DBN1Q16643 649 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CDKN3Q16667 212 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 INSCQ1MX18 579 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CTC1Q2NKJ3 1217 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 GAB4Q2WGN9 574 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 RETSATQ6NUM9 610 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ESRP1Q6NXG1 681 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 CAPN12Q6ZSI9 719 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CLEC14AQ86T13 490 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ADIPOR2Q86V24 386 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 LCA5Q86VQ0 697 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 KCNMB4Q86W47 210 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 TMEM25Q86YD3 366 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 MFN1Q8IWA4 741 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 APCDD1Q8J025 514 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CARNMT1Q8N4J0 409 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 CELF5Q8N6W0 485 aaKnown RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 EFHBQ8N7U6 833 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 C2CD4AQ8NCU7 369 aaPredicted RBP6.85□□□□□ -1.31
MSH5-217ENST00000494458 ITFG1Q8TB96 612 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ATP2A3Q93084 1043 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ECHDC3Q96DC8 303 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 RSPRY1Q96DX4 576 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 MAGEB18Q96M61 343 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 ASB16Q96NS5 453 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 LYSMD1Q96S90 227 aa6.85□□□□□ -1.31
MSH5-217ENST00000494458 SMC6Q96SB8 1091 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms