RNA–Protein interactions for RNA: ENST00000494043.1

MCF2L-231, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 896 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-231ENST00000494043 RANBP10Q6VN20 620 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 DPY19L3Q6ZPD9 716 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 TPRG1Q6ZUI0 275 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 CENPUQ71F23 418 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 TMC3Q7Z5M5 1100 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 OR52K1Q8NGK4 314 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 OR2A12Q8NGT7 310 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 ATXN2LQ8WWM7 1075 aaKnown RBP11.52□□□□□ -0.57
MCF2L-231ENST00000494043 ANKRD7Q92527 254 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 VOPP1Q96AW1 172 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 IFT43Q96FT9 208 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 TUBGCP5Q96RT8 1024 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 TRIB3Q96RU7 358 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 APOL2Q9BQE5 337 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 TXLNGYQ9BZA5 131 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 TMEM245Q9H330 911 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 ATP13A3Q9H7F0 1226 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 SAYSD1Q9NPB0 183 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 PIH1D1Q9NWS0 290 aaKnown RBP11.52□□□□□ -0.57
MCF2L-231ENST00000494043 SORCS3Q9UPU3 1222 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 RAI2Q9Y5P3 530 aa11.52□□□□□ -0.57
MCF2L-231ENST00000494043 ANTXRLA6NF34 631 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 SHISA7A6NL88 538 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 SOCS5O75159 536 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 BANF1O75531 89 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 PIGNO95427 931 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 NDST3O95803 873 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 EGFP01133 1207 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ATXN1LP0C7T5 689 aaKnown RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 HLA-EP13747 358 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 HLA-DPA1P20036 260 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 SERPINA4P29622 427 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 GKP32189 559 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 IL12RB1P42701 662 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 KIR2DL1P43626 348 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 TNNT3P45378 269 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 SEC13P55735 322 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 SESN2P58004 480 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 RAD51Q06609 339 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 BCL2L1Q07817 233 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 DHX9Q08211 1270 aaKnown RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 PDIA2Q13087 525 aaKnown RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 MTM1Q13496 603 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ENPP2Q13822 863 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 GRM3Q14832 879 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 SLC1A5Q15758 541 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 MLF2Q15773 248 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 BEND6Q5SZJ8 279 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 EMC10Q5UCC4 262 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 KDELC2Q7Z4H8 507 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 RELL1Q8IUW5 271 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 AGGF1Q8N302 714 aaeCLIP11.51□□□□□ -0.574e-7■■■□□ 15.7
MCF2L-231ENST00000494043 ZNF366Q8N895 744 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ZNF513Q8N8E2 541 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 DNAAF3Q8N9W5 541 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 CHST14Q8NCH0 376 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 FAM3CQ92520 227 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 PTPRN2Q92932 1015 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ACOX2Q99424 681 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 WDR83Q9BRX9 315 aaKnown RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 CPEB1Q9BZB8 566 aaKnown RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 MTG2Q9H4K7 406 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ZDHHC6Q9H6R6 413 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ARNT2Q9HBZ2 717 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 CACNA2D2Q9NY47 1150 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 ARIH1Q9Y4X5 557 aaPredicted RBP11.51□□□□□ -0.57
MCF2L-231ENST00000494043 PCDHGC4Q9Y5F7 938 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 STON1Q9Y6Q2 735 aa11.51□□□□□ -0.57
MCF2L-231ENST00000494043 MAN2B1O00754 1011 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 TRAFD1O14545 582 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-231ENST00000494043 ALOX15BO15296 676 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 HTRA2O43464 458 aaPredicted RBP11.5□□□□□ -0.57
MCF2L-231ENST00000494043 FZD6O60353 706 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 PGLSO95336 258 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 CPP00450 1065 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 PRLP01236 227 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 FGF1P05230 155 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 BMP1P13497 986 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 MGAT1P26572 445 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 MAGEA4P43358 317 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 CHRNA4P43681 627 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 NPY2RP49146 381 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 PMS2P54278 862 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 PRKCQQ04759 706 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 GALNT3Q14435 633 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 FASTKD3Q14CZ7 662 aaKnown RBP11.5□□□□□ -0.57
MCF2L-231ENST00000494043 SIRPB2Q5JXA9 342 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 C9orf64Q5T6V5 341 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 CAMK1DQ8IU85 385 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 ZBED8Q8IZ13 594 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 MREGQ8N565 214 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 SLC25A41Q8N5S1 370 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 FBXO36Q8NEA4 188 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 LPCAT1Q8NF37 534 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 KCNV2Q8TDN2 545 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 LRRC39Q96DD0 335 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 SIGLEC10Q96LC7 697 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 ASB2Q96Q27 587 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 HEPHQ9BQS7 1158 aa11.5□□□□□ -0.57
MCF2L-231ENST00000494043 ARFGAP3Q9NP61 516 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms