RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 BBS5Q8N3I7 341 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 HJURPQ8NCD3 748 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 PSKH2Q96QS6 385 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 DDX50Q9BQ39 737 aaKnown RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 C1QTNF1Q9BXJ1 281 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 LRRC3Q9BY71 257 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ECT2Q9H8V3 914 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 KCNK13Q9HB14 408 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SLC40A1Q9NP59 571 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF358Q9NW07 568 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.75□□□□□ -0.69
CLCN6-208ENST00000494028 COPG2Q9UBF2 871 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 LHX3Q9UBR4 397 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 DCDC2Q9UHG0 476 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 DCTN4Q9UJW0 460 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 FBXO5Q9UKT4 447 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 SLC39A10Q9ULF5 831 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 ANKRD6Q9Y2G4 727 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 TBC1D30Q9Y2I9 924 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 CPQQ9Y646 472 aa10.75□□□□□ -0.69
CLCN6-208ENST00000494028 NOTCH4Q99466 2003 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 COL4A3Q01955 1670 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZBBXA8MT70 800 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 SCAMP3O14828 347 aaKnown RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 TGM5O43548 720 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 LDB2O43679 373 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 LUC7L3O95232 432 aaKnown RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 NDST3O95803 873 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 SLC35E2BP0CK96 405 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 KCNA4P22459 653 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ARRB2P32121 409 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ARSDP51689 593 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 CLCN5P51795 746 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZXDBP98169 803 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 CDK18Q07002 472 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF177Q13360 481 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 CTBP1Q13363 440 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 THOC5Q13769 683 aaKnown RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 RFTN1Q14699 578 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF783Q6ZMS7 281 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 C16orf59Q7L2K0 433 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 GALNT7Q86SF2 657 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 HERC6Q8IVU3 1022 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 C10orf107Q8IVU9 208 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ARID3BQ8IVW6 561 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 CENPLQ8N0S6 344 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 FIBCD1Q8N539 461 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ARL14EPQ8N8R7 260 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 OR6Y1Q8NGX8 325 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 WFDC5Q8TCV5 224 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 SP7Q8TDD2 431 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 PRR11Q96HE9 360 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 EXOC2Q96KP1 924 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 SPON2Q9BUD6 331 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 TDRD1Q9BXT4 1180 aaKnown RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 C20orf27Q9GZN8 174 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 MFSD1Q9H3U5 465 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF395Q9H8N7 513 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 FBXO6Q9NRD1 293 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-208ENST00000494028 STK39Q9UEW8 545 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 MID2Q9UJV3 735 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 PCDHB12Q9Y5F1 795 aa10.74□□□□□ -0.69
CLCN6-208ENST00000494028 KIF26AQ9ULI4 1882 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 A0A0G2JND7 137 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 CFAP73A6NFT4 308 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 C2orf71A6NGG8 1288 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 G3V2L1 256 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 H0YHG0 523 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 TK2O00142 265 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 CCL22O00626 93 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SLC7A4O43246 635 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ITM2AO43736 263 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SNAP91O60641 907 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 TBL1XO60907 577 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 DNAJC6O75061 913 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 LYPLA1O75608 230 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ZMPSTE24O75844 475 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 TMCC1O94876 653 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 UNC5CO95185 931 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 CD160O95971 181 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 EPOP01588 193 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 AHSGP02765 367 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 C8AP07357 584 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SERPINF2P08697 491 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 MYL2P10916 166 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 GABRR2P28476 465 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 CA8P35219 290 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 AVPR1AP37288 418 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ZNF140P52738 457 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 ARFIP2P53365 341 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 PGGT1BP53609 377 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 TAS2R39P59534 338 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 NSUN2Q08J23 767 aaKnown RBP eCLIP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 STX3Q13277 289 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 PPIGQ13427 754 aaKnown RBP eCLIP10.73□□□□□ -0.692e-10■□□□□ 11.2
CLCN6-208ENST00000494028 ZNF460Q14592 562 aa10.73□□□□□ -0.69
CLCN6-208ENST00000494028 USP10Q14694 798 aaKnown RBP10.73□□□□□ -0.69
CLCN6-208ENST00000494028 SETDB1Q15047 1291 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms