RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 SARDHQ9UL12 918 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 PYCARDQ9ULZ3 195 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SCML1Q9UN30 329 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 SLC6A14Q9UN76 642 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 NCKAP1Q9Y2A7 1128 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 MSRB2Q9Y3D2 182 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTSA-209ENST00000493522 WASF2Q9Y6W5 498 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 ADAMTS9Q9P2N4 1935 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 ANKRD11Q6UB99 2663 aaPredicted RBP11.75□□□□□ -0.53
CTSA-209ENST00000493522 TRPM6Q9BX84 2022 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 PI4KAP42356 2102 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 CACNA1EQ15878 2313 aa11.75□□□□□ -0.53
CTSA-209ENST00000493522 LOC400499M0QZD8 3231 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 A0A1W2PP55 124 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 PLK4O00444 970 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 OPHN1O60890 802 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 NDUFS2O75306 463 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 LEFTY1O75610 366 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 SERPINF2P08697 491 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 PYGMP11217 842 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 CD6P30203 668 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 OXTRP30559 389 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 GKP32189 559 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 PTPN7P35236 360 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 HSPA9P38646 679 aaKnown RBP11.74□□□□□ -0.53
CTSA-209ENST00000493522 MMP13P45452 471 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 METAP1P53582 386 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 RAD51Q06609 339 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 ADCY2Q08462 1091 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 AP1B1Q10567 949 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 PDK1Q15118 436 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 RPS6KA1Q15418 735 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 ARSIQ5FYB1 569 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 DCAF12L1Q5VU92 463 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 BBS12Q6ZW61 710 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 PIP4P1Q86T03 277 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 LRRC49Q8IUZ0 686 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 REXO1L1PQ8IX06 675 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 CCDC13Q8IYE1 715 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 AADATQ8N5Z0 425 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 TSEN2Q8NCE0 465 aaKnown RBP11.74□□□□□ -0.53
CTSA-209ENST00000493522 P3H4Q92791 437 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 TOE1Q96GM8 510 aaKnown RBP11.74□□□□□ -0.53
CTSA-209ENST00000493522 PPP1R16AQ96I34 528 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 OLFM3Q96PB7 478 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 LGMNQ99538 433 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 HERPUD2Q9BSE4 406 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 ITM2CQ9NQX7 267 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 SERGEFQ9UGK8 458 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 PPM1HQ9ULR3 514 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 TTLL3Q9Y4R7 772 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 NBEAQ8NFP9 2946 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 CELSR3Q9NYQ7 3312 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 GON4LQ3T8J9 2241 aa11.74□□□□□ -0.53
CTSA-209ENST00000493522 SPAARA0A1B0GVQ0 90 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 GOLGA6L9A6NEM1 432 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 USP27XA6NNY8 438 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 INSIG1O15503 277 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 KIF5CO60282 957 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 POP4O95707 220 aaKnown RBP11.73□□□□□ -0.53
CTSA-209ENST00000493522 PEX11BO96011 259 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 IGLV3-19P01714 112 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 UGT2B4P06133 528 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 CCNCP24863 283 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 RGRP47804 291 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 NR2C2P49116 596 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 RENBPP51606 427 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 ZNF33AQ06730 810 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 PPIDQ08752 370 aaKnown RBP11.73□□□□□ -0.53
CTSA-209ENST00000493522 CNTN1Q12860 1018 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 COL9A2Q14055 689 aaPredicted RBP11.73□□□□□ -0.53
CTSA-209ENST00000493522 HNRNPDQ14103 355 aaKnown RBP11.73□□□□□ -0.53
CTSA-209ENST00000493522 MYLK3Q32MK0 819 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 MEI1Q5TIA1 1274 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 MARC1Q5VT66 337 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 USP30Q70CQ3 517 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 BZW1Q7L1Q6 419 aaKnown RBP11.73□□□□□ -0.53
CTSA-209ENST00000493522 SRLQ86TD4 932 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 PLPP6Q8IY26 295 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 DEFB119Q8N690 84 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 PAF1Q8N7H5 531 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 TMIEQ8NEW7 156 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 ARRDC3Q96B67 414 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 TSGA13Q96PP4 275 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 PSKH2Q96QS6 385 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 GPR174Q9BXC1 333 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 NT5MQ9NPB1 228 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 HAUS2Q9NVX0 235 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 SEPT10Q9P0V9 454 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 SAE1Q9UBE0 346 aaPredicted RBP11.73□□□□□ -0.53
CTSA-209ENST00000493522 KLK13Q9UKR3 277 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 FZD4Q9ULV1 537 aa11.73□□□□□ -0.53
CTSA-209ENST00000493522 FAM47DPA6NHR8 397 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MEI4A8MW99 385 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 APOC4-APOC2K7ER74 178 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 KCNK1O00180 336 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 KCNK3O14649 394 aa11.72□□□□□ -0.53
CTSA-209ENST00000493522 MUSKO15146 869 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms