RNA–Protein interactions for RNA: ENST00000492099.1

SH3GL3-204, Transcript of SH3 domain containing GRB2 like 3, endophilin A3, humanhuman

TSL 1 (best)

Gene SH3GL3, Length 1,170 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL3-204ENST00000492099 POLNQ7Z5Q5 900 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 EID2Q8N6I1 236 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 IFT43Q96FT9 208 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 BTBD6Q96KE9 485 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 CNDP2Q96KP4 475 aaKnown RBP27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 BMFQ96LC9 184 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 ZNF641Q96N77 438 aaPredicted RBP27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 TUBGCP5Q96RT8 1024 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 GGT7Q9UJ14 662 aa27.43■■□□□ 1.98
SH3GL3-204ENST00000492099 FPGTO14772 594 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 SPINT1O43278 529 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 TCF4P15884 667 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 TIMP2P16035 220 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 XPAP23025 273 aaPredicted RBP27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 EIF4A3P38919 411 aaKnown RBP27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 KANSL1Q7Z3B3 1105 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 PTAR1Q7Z6K3 402 aaPredicted RBP27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 DENND6BQ8NEG7 585 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 DNAJC7Q99615 494 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 CINPQ9BW66 212 aaPredicted RBP27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 SUV39H2Q9H5I1 410 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 ZNHIT6Q9NWK9 470 aaKnown RBP27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 IPO11Q9UI26 975 aaKnown RBP27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 NENFQ9UMX5 172 aa27.42■■□□□ 1.98
SH3GL3-204ENST00000492099 ENC1O14682 589 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 RAD51BO15315 384 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 TPM1P09493 284 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 RABIFP47224 123 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 SLC25A11Q02978 314 aaKnown RBP27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 NSUN2Q08J23 767 aaKnown RBP eCLIP27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 ELP6Q0PNE2 266 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 SLC18A3Q16572 532 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 TSR1Q2NL82 804 aaKnown RBP27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 TMCO3Q6UWJ1 677 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 KDF1Q8NAX2 398 aaPredicted RBP27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 CXorf40AQ8TE69 158 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 CSPG4P5Q96PW8 444 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 KLF6Q99612 283 aaPredicted RBP27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 PCDHGA1Q9Y5H4 931 aa27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 COL5A1P20908 1838 aaPredicted RBP27.41■■□□□ 1.98
SH3GL3-204ENST00000492099 POM121BA6NF01 834 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 PIGNO95427 931 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 AMPD1P23109 780 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 HADHQ16836 314 aaKnown RBP27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 CFAP58Q5T655 872 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 BRAT1Q6PJG6 821 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 TMPRSS7Q7RTY8 843 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 SRLQ86TD4 932 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 SLC22A18ASQ8N1D0 253 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 GALNT15Q8N3T1 639 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 TSEN2Q8NCE0 465 aaKnown RBP27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 ZNF564Q8TBZ8 553 aaPredicted RBP27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 ZNF599Q96NL3 588 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 C1QTNF7Q9BXJ2 289 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 DEF6Q9H4E7 631 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 GPR27Q9NS67 375 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 UVRAGQ9P2Y5 699 aa27.4■■□□□ 1.98
SH3GL3-204ENST00000492099 SSU72P8A0A1W2PR75 194 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 TSPAN11A1L157 253 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 TM7SF2O76062 418 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 H2AFZP0C0S5 128 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 CDK4P11802 303 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 RENBPP51606 427 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 UGP2Q16851 508 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 LRRC73Q5JTD7 316 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 TXNRD3NBQ6F5E7 133 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 CCNI2Q6ZMN8 369 aaPredicted RBP27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 ARHGAP36Q6ZRI8 547 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 H2AFVQ71UI9 128 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 VSTM4Q8IW00 320 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 CTNNBL1Q8WYA6 563 aaPredicted RBP27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 ATP13A3Q9H7F0 1226 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 PCDH18Q9HCL0 1135 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 CTTNBP2NLQ9P2B4 639 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 RCOR3Q9P2K3 495 aaPredicted RBP27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 LCMT1Q9UIC8 334 aa27.39■■□□□ 1.98
SH3GL3-204ENST00000492099 BUB1BO60566 1050 aaPredicted RBP27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 MMP20O60882 483 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 SDC3O75056 442 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 C1SP09871 688 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 DGKAP23743 735 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 SERPINA4P29622 427 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 SSR1P43307 286 aaKnown RBP27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 KRT81Q14533 505 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 TMEM52BQ4KMG9 183 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 TMCO4Q5TGY1 634 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 RNF214Q8ND24 703 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 CENPTQ96BT3 561 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 ETNK2Q9NVF9 386 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 SEPT3Q9UH03 358 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 FRYQ5TBA9 3013 aa27.38■■□□□ 1.97
SH3GL3-204ENST00000492099 SPTY2D1-AS1A0A0U1RR47 76 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 SERPINB6P35237 376 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 RGRP47804 291 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 LBRQ14739 615 aaKnown RBP27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 ASTE1Q2TB18 679 aaPredicted RBP27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 HS1BP3Q53T59 392 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 CCDC157Q569K6 752 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 ERAP2Q6P179 960 aa27.37■■□□□ 1.97
SH3GL3-204ENST00000492099 CAMK1DQ8IU85 385 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms