RNA–Protein interactions for RNA: ENST00000490278.1

CD46-216, Transcript of CD46 molecule, humanhuman

TSL 2

Gene CD46, Length 747 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-216ENST00000490278 RANBP17Q9H2T7 1088 aaKnown RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 BRF2Q9HAW0 419 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 KRCC1Q9NPI7 259 aaPredicted RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 PCDHB16Q9NRJ7 776 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 ANKRD10Q9NXR5 420 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 CTNNAL1Q9UBT7 734 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 NDRG3Q9UGV2 375 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 A4GNTQ9UNA3 340 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 ZNF521Q96K83 1311 aa4.12□□□□□ -1.75
CD46-216ENST00000490278 TDRD9Q8NDG6 1382 aaKnown RBP4.12□□□□□ -1.75
CD46-216ENST00000490278 NPIPB15A6NHN6 443 aaPredicted RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 KLRF2D3W0D1 207 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 H0YGN5 161 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 TAF4O00268 1085 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 ATP2C2O75185 946 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 SEC14L2O76054 403 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 DDX58O95786 925 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 CLEC3BP05452 202 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 PSG1P11464 419 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 ARSBP15848 533 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 SRD5A1P18405 259 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 EDN2P20800 178 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 CAPN3P20807 821 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 PSMA4P25789 261 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 NR4A2P43354 598 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 GABRB2P47870 512 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 RPL7AP62424 266 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 PPATQ06203 517 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 FAM27E3Q08E93 113 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 FOXD4Q12950 439 aaPredicted RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 DCTN2Q13561 401 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 LAMB3Q13751 1172 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 PPP2R5BQ15173 497 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 RNPS1Q15287 305 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 TBCEQ15813 527 aaPredicted RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 GSTA3Q16772 222 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 CCDC30Q5VVM6 783 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 DCAF12L2Q5VW00 463 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 CES5AQ6NT32 575 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 PATL1Q86TB9 770 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 PALB2Q86YC2 1186 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 C7orf57Q8NEG2 295 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 ZC3HAV1LQ96H79 300 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 BBS4Q96RK4 519 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 PIP5K1AQ99755 562 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 WDR26Q9H7D7 661 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 CATSPERBQ9H7T0 1116 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 NCKIPSDQ9NZQ3 722 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 FAM96BQ9Y3D0 163 aa4.11□□□□□ -1.75
CD46-216ENST00000490278 SETD1BQ9UPS6 1966 aaKnown RBP4.11□□□□□ -1.75
CD46-216ENST00000490278 LRRC53A6NM62 1247 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 HSPB2A8KAH6 182 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 CHL1O00533 1208 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 TGFB1I1O43294 461 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 USO1O60763 962 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 TFP02787 698 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 CYP1A2P05177 515 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 SPARCP09486 303 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 TFPIP10646 304 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 BSGP35613 385 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 RGS2P41220 211 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 CXCR3P49682 368 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 ENTPD1P49961 510 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 GNAQP50148 359 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 RARSP54136 660 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 P2RX3P56373 397 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 ZP1P60852 638 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 RPS3AP61247 264 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 DCAF7P61962 342 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 LMOD3Q0VAK6 560 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 GPR18Q14330 331 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 HSPB2Q16082 182 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 ODF3L2Q3SX64 289 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 HYIQ5T013 277 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 CDC73Q6P1J9 531 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 C4orf50Q6ZRC1 276 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 Q6ZTK2 550 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 TRILQ7L0X0 811 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 IRF2BP2Q7Z5L9 587 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 CTU1Q7Z7A3 348 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 DHX40Q8IX18 779 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 GJC3Q8NFK1 279 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 SMG7Q92540 1137 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 OTULINQ96BN8 352 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 SIN3AQ96ST3 1273 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 MXRA8Q9BRK3 442 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 MSTO1Q9BUK6 570 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 GLIS2Q9BZE0 524 aaPredicted RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 PRKRIP1Q9H875 184 aaPredicted RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 RNF7Q9UBF6 113 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 SRPRBQ9Y5M8 271 aaKnown RBP4.1□□□□□ -1.75
CD46-216ENST00000490278 RAI2Q9Y5P3 530 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 SCINQ9Y6U3 715 aa4.1□□□□□ -1.75
CD46-216ENST00000490278 A0A0U1RQF3 1178 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 RPS10-NUDT3A0A1W2PQS6 291 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 PGPEP1LA6NFU8 196 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 B4DGG1 531 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 USP17L23D6RBM5 183 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 NPIPB11E5RHQ5 1161 aa4.09□□□□□ -1.75
CD46-216ENST00000490278 MS4A18H0YCH9 400 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms