RNA–Protein interactions for RNA: ENST00000490258.1

CRNKL1-203, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 2

Gene CRNKL1, Length 733 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-203ENST00000490258 LENG9Q96B70 501 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 NSL1Q96IY1 281 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 HIC2Q96JB3 615 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PRICKLE1Q96MT3 831 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CATSPER2Q96P56 530 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TUBGCP5Q96RT8 1024 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FIZ1Q96SL8 496 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PCDHB18PQ96TA0 734 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ARPC5LQ9BPX5 153 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 REEP2Q9BRK0 252 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 STRA6Q9BX79 667 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 OSBPL8Q9BZF1 889 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 RANBP17Q9H2T7 1088 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 KCNK13Q9HB14 408 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNF287Q9HBT7 754 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 BARX1Q9HBU1 254 aaPredicted RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 KCNK9Q9NPC2 374 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SLCO1B3Q9NPD5 702 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PDGFCQ9NRA1 345 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 CHST12Q9NRB3 414 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 NDE1Q9NXR1 346 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TAS2R1Q9NYW7 299 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 FLRT1Q9NZU1 646 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 DDX25Q9UHL0 483 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNHIT2Q9UHR6 403 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 HERC5Q9UII4 1024 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNF112Q9UJU3 913 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 PADI4Q9UM07 663 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 SHOC2Q9UQ13 582 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 MTO1Q9Y2Z2 717 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TCAF1Q9Y4C2 921 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TESMINQ9Y4I5 508 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 TNPO3Q9Y5L0 923 aaKnown RBP3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 NLRC5Q86WI3 1866 aa3.55□□□□□ -1.84
CRNKL1-203ENST00000490258 EIF4E1BA6NMX2 242 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FOXO6A8MYZ6 492 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 TISP43B9A030 160 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 E7ESA3 106 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM86B1E9PN63 330 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CBX4O00257 560 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 PDHXO00330 501 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 VWA5AO00534 786 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 SCDO00767 359 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FCHO1O14526 889 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ZBTB5O15062 677 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 VILLO15195 856 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 WDR46O15213 610 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ALOX15BO15296 676 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 GYG2O15488 501 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CLDN3O15551 220 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 DENRO43583 198 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 PSTPIP1O43586 416 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 B4GALT4O60513 344 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FKBP6O75344 327 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 TBCAO75347 108 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MED24O75448 989 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 TM7SF2O76062 418 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FTLP02792 175 aaPredicted RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ERBB2P04626 1255 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ASNSP08243 561 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CD48P09326 243 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 DLDP09622 509 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FAM86B2P0C5J1 330 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ZNF286BP0CG31 522 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MYBL1P10243 752 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ABCB4P21439 1286 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 TNFAIP3P21580 790 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 RRM1P23921 792 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 STIP1P31948 543 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 GTF2H1P32780 548 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CIITAP33076 1130 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 PTPN7P35236 360 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MAGEA4P43358 317 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 RPL5P46777 297 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CASP4P49662 377 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ACADVLP49748 655 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CHN2P52757 468 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 BACE1P56817 501 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 GEMIN4P57678 1058 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 AP2B1P63010 937 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CD83Q01151 205 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MYL7Q01449 175 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FMO1Q01740 532 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ENPEPQ07075 957 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 TBL3Q12788 808 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 ASPHQ12797 758 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 SF3A3Q12874 501 aaKnown RBP eCLIP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CRHR2Q13324 411 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MSLNQ13421 630 aaPredicted RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 FOXE3Q13461 319 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 USP10Q14694 798 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MORF4L2Q15014 288 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 TMED2Q15363 201 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 SLC1A5Q15758 541 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 PKN2Q16513 984 aaKnown RBP3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 MAPK6Q16659 721 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 Q4G0T1 1027 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 CBWD6Q4V339 395 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 EPC2Q52LR7 807 aa3.54□□□□□ -1.84
CRNKL1-203ENST00000490258 PRR16Q569H4 304 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms