RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 ARHGAP36Q6ZRI8 547 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 RHOT1Q8IXI2 618 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 OXR1Q8N573 874 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 TSEN2Q8NCE0 465 aaKnown RBP14.45□□□□□ -0.1
BRCA1-218ENST00000489037 FAM174AQ8TBP5 190 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-218ENST00000489037 CXorf40AQ8TE69 158 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 SETD7Q8WTS6 366 aaKnown RBP14.45□□□□□ -0.1
BRCA1-218ENST00000489037 ZNF830Q96NB3 372 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-218ENST00000489037 SLC17A9Q9BYT1 436 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 KLHL11Q9NVR0 708 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 DDX56Q9NY93 547 aaKnown RBP14.45□□□□□ -0.1
BRCA1-218ENST00000489037 PCDHGB2Q9Y5G2 931 aa14.45□□□□□ -0.1
BRCA1-218ENST00000489037 EPN1Q9Y6I3 576 aaPredicted RBP14.45□□□□□ -0.1
BRCA1-218ENST00000489037 LAMA1P25391 3075 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 LRRD1A4D1F6 860 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 YKT6O15498 198 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 GJB3O75712 270 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 PIGNO95427 931 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 WNT1P04628 370 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 TNNT1P13805 278 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 CD59P13987 128 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 PRLRP16471 622 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 MX2P20592 715 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 IL4RP24394 825 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 ABL2P42684 1182 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 ARRB1P49407 418 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 SCNN1BP51168 640 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 POLR2LP62875 67 aaKnown RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 PAFAH1B3Q15102 231 aaKnown RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 ZNF423Q2M1K9 1284 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 MARC1Q5VT66 337 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 LRRC38Q5VT99 294 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 SEL1L3Q68CR1 1132 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 TIGD7Q6NT04 549 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 ERAP2Q6P179 960 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 BRAT1Q6PJG6 821 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 CPNE8Q86YQ8 564 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 NAXDQ8IW45 347 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 TP53INP2Q8IXH6 220 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 PCDH19Q8TAB3 1148 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 CALR3Q96L12 384 aaKnown RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 PSKH2Q96QS6 385 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 ELF4Q99607 663 aaPredicted RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 MYOCQ99972 504 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 C1QTNF7Q9BXJ2 289 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 IL21RQ9HBE5 538 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 IMPACTQ9P2X3 320 aa14.44□□□□□ -0.1
BRCA1-218ENST00000489037 ZFR2Q9UPR6 939 aaKnown RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 FNDC3AQ9Y2H6 1198 aaKnown RBP14.44□□□□□ -0.1
BRCA1-218ENST00000489037 A0A1W2PQ67 120 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 MED19A0JLT2 244 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-218ENST00000489037 H0Y8X5 98 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 KCNK3O14649 394 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 WNT9AO14904 365 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 FLRT2O43155 660 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 SH3BP5O60239 455 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 MAFKO60675 156 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 NDUFA10O95299 355 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 PAK4O96013 591 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-218ENST00000489037 KRT1P04264 644 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 TIMP2P16035 220 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 NFKBIAP25963 317 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 CDC25BP30305 580 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 NAP1L1P55209 391 aaKnown RBP14.43□□□□□ -0.1
BRCA1-218ENST00000489037 NXPH1P58417 271 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 AP1S1P61966 158 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 SLC10A7Q0GE19 358 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 IFI16Q16666 785 aaKnown RBP14.43□□□□□ -0.1
BRCA1-218ENST00000489037 TMEM259Q4ZIN3 620 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 N4BP2L1Q5TBK1 243 aaPredicted RBP14.43□□□□□ -0.1
BRCA1-218ENST00000489037 NCBP2-AS2Q69YL0 99 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 PIP4P1Q86T03 277 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 CAMK1DQ8IU85 385 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 TXLNBQ8N3L3 684 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 ASB12Q8WXK4 309 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 RNF157Q96PX1 679 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 ERVMER34-1Q9H9K5 563 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 SCUBE2Q9NQ36 999 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 HS3ST3A1Q9Y663 406 aa14.43□□□□□ -0.1
BRCA1-218ENST00000489037 DCHS1Q96JQ0 3298 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 A0A0A6YYK5 440 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 A0A1B0GTQ1 180 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 IGLON5A6NGN9 336 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 SOWAHDA6NJG2 315 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 A6NNZ2 444 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 ZNF487B1APH4 448 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 FPGTO14772 594 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 GIPC1O14908 333 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 MFSD11O43934 449 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 TM7SF2O76062 418 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 ADRB1P08588 477 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 THEGLP0DJG4 465 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 ZFXP17010 805 aaPredicted RBP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 COMTP21964 271 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 GARSP41250 739 aaKnown RBP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 MMP13P45452 471 aa14.42□□□□□ -0.1
BRCA1-218ENST00000489037 HADHBP55084 474 aaKnown RBP14.42□□□□□ -0.1
BRCA1-218ENST00000489037 ITKQ08881 620 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms