RNA–Protein interactions for RNA: ENST00000488149.5

MCF2L2-212, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 2

Gene MCF2L2, Length 7,813 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-212ENST00000488149 SNX6Q9UNH7 406 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 ROBO3Q96MS0 1386 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 CEP170BQ9Y4F5 1589 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 RGS10O43665 173 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 NR2F6P10588 404 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 UMPSP11172 480 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TCF4P15884 667 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 NOS2P35228 1153 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 CAP2P40123 477 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SEPHS1P49903 392 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SLC5A3P53794 718 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 NOMO3P69849 1222 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 GTF2BQ00403 316 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 IL18R1Q13478 541 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TNFAIP8L3Q5GJ75 292 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 STXBP5Q5T5C0 1151 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SPOCK2Q92563 424 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 EDEM1Q92611 657 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 ZDHHC15Q96MV8 337 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SLC38A2Q96QD8 506 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 YIPF2Q9BWQ6 316 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 POPDC2Q9HBU9 364 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TOR4AQ9NXH8 423 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 DDX43Q9NXZ2 648 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 VPS28Q9UK41 221 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 FAM50BQ9Y247 325 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 MRPS7Q9Y2R9 242 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 DGKBQ9Y6T7 804 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SLC12A8A0AV02 714 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 H6PDO95479 791 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TAS2R40P59535 323 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 PLCL1Q15111 1095 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 C15orf59Q2T9L4 293 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 FAM131AQ6UXB0 335 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 ERI1Q8IV48 349 aaKnown RBP8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TAMM41Q96BW9 452 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 OMDQ99983 421 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TMEM39BQ9GZU3 492 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SP140LQ9H930 580 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 USP20Q9Y2K6 914 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 PSMD11O00231 422 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 ITGB6P18564 788 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 CCDC157Q569K6 752 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TXNDC11Q6PKC3 985 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 ZFAND2BQ8WV99 257 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 SERAC1Q96JX3 654 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 TMEM138Q9NPI0 162 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 PTGFRNQ9P2B2 879 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 PFDN2Q9UHV9 154 aa8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 COL3A1P02461 1466 aaPredicted RBP8.32□□□□□ -1.08
MCF2L2-212ENST00000488149 A0A1W2PRG6 482 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 C2orf71A6NGG8 1288 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ANKRD63C9JTQ0 380 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 CBX4O00257 560 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 HMGB3O15347 200 aaKnown RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 SLC22A3O75751 556 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ALDH1A2O94788 518 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 THP07101 528 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 DGKAP23743 735 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 NFE2Q16621 373 aaPredicted RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 GPRIN3Q6ZVF9 776 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 SCAIQ8N9R8 606 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 SYT15Q9BQS2 421 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 SNRNP25Q9BV90 132 aaKnown RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 NFKBIL1Q9UBC1 381 aaPredicted RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 TRAF6Q9Y4K3 522 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 A0A0J9YYE9 177 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ACKR2O00590 384 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ECDO95905 644 aaPredicted RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 GPIP06744 558 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 HNRNPLP14866 589 aaKnown RBP eCLIP8.31□□□□□ -1.084e-8■■■■□ 25
MCF2L2-212ENST00000488149 CYP2C18P33260 490 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 STARD3Q14849 445 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 PSMD5Q16401 504 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ACSBG2Q5FVE4 666 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 OOSP2Q86WS3 158 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 HELQQ8TDG4 1101 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 WNT8BQ93098 351 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 TMEM159Q96B96 161 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 SERPINB11Q96P15 392 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 CDK5RAP1Q96SZ6 601 aaKnown RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 CAPN10Q9HC96 672 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 DNAAF2Q9NVR5 837 aaKnown RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ATP6AP2A0A1C7CYW4 349 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 ATP6AP2O75787 350 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 BMP10O95393 424 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 OR56A5P0C7T3 313 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 OR1E1P30953 314 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 GUCA1AP43080 201 aaPredicted RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 CRATP43155 626 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 RPS9P46781 194 aaKnown RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 RPL7AP62424 266 aaKnown RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 CCNIQ14094 377 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 PGM5Q15124 567 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 AHI1Q8N157 1196 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 LRRC57Q8N9N7 239 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 RASSF5Q8WWW0 418 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 HAS1Q92839 578 aa8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 CENPNQ96H22 339 aaPredicted RBP8.31□□□□□ -1.08
MCF2L2-212ENST00000488149 WASF2Q9Y6W5 498 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms