RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 ARRDC3Q96B67 414 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 HES6Q96HZ4 224 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 KLHL32Q96NJ5 620 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 VAT1Q99536 393 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 C1QTNF7Q9BXJ2 289 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 ZDHHC5Q9C0B5 715 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 SUV39H2Q9H5I1 410 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 C6orf106Q9H6K1 298 aaPredicted RBP14.81□□□□□ -0.04
LIMS3-205ENST00000487150 SEMA4GQ9NTN9 838 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 PLXND1Q9Y4D7 1925 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 GPR179Q6PRD1 2367 aa14.81□□□□□ -0.04
LIMS3-205ENST00000487150 CHD5Q8TDI0 1954 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 LATO43561 262 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 STK10O94804 968 aaKnown RBP14.8□□□□□ -0.04
LIMS3-205ENST00000487150 SYPP08247 313 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 PEX5P50542 639 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 AFF3P51826 1226 aaKnown RBP14.8□□□□□ -0.04
LIMS3-205ENST00000487150 RPS21P63220 83 aaKnown RBP14.8□□□□□ -0.04
LIMS3-205ENST00000487150 SPEM2Q0P670 501 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 AP1B1Q10567 949 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 NDUFAF2Q8N183 169 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 ALG3Q92685 438 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 BIRC7Q96CA5 298 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 FEM1CQ96JP0 617 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 RBM22Q9NW64 420 aaKnown RBP eCLIP14.8□□□□□ -0.04
LIMS3-205ENST00000487150 VPS13AQ96RL7 3174 aa14.8□□□□□ -0.04
LIMS3-205ENST00000487150 A0A1W2PPC4 97 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 UPK3BL1B0FP48 263 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 UPK3BL2E5RIL1 263 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 BCAT2O15382 392 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 INSIG1O15503 277 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 MAGEC1O60732 1142 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 RNGTTO60942 597 aaKnown RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 PCDH8O95206 1070 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 CFIP05156 583 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 SERPINF2P08697 491 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 CR2P20023 1033 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 GRIA4P48058 902 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 METAP1P53582 386 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 RACK1P63244 317 aaKnown RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 ARHGAP8P85298 464 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 ITKQ08881 620 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 OVGP1Q12889 678 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 SLC10A2Q12908 348 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 PRKD1Q15139 912 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 RPS6KA1Q15418 735 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 AASDHQ4L235 1098 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 SLC23A3Q6PIS1 610 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 IL27RAQ6UWB1 636 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 PRR23CQ6ZRP0 262 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 TTC7BQ86TV6 843 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 HORMAD1Q86X24 394 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 CDKL3Q8IVW4 592 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 NETO2Q8NC67 525 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 FAM174AQ8TBP5 190 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 PPP1R2P1Q96PQ5 205 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 LGMNQ99538 433 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 FRMD8P1Q9BZ68 369 aaPredicted RBP14.79□□□□□ -0.04
LIMS3-205ENST00000487150 MIR1-1HGQ9H1L0 117 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 CARD9Q9H257 536 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 NT5MQ9NPB1 228 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 DNPEPQ9ULA0 475 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 SLC6A14Q9UN76 642 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 TTLL3Q9Y4R7 772 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 FADS3Q9Y5Q0 445 aa14.79□□□□□ -0.04
LIMS3-205ENST00000487150 MYO15AQ9UKN7 3530 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 MAP3K6O95382 1288 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 PIGNO95427 931 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 IGHV4-34P06331 123 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 AKT2P31751 481 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 GKP32189 559 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 TNNT3P45378 269 aaPredicted RBP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 ATXN3P54252 364 aaPredicted RBP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 RPL26P61254 145 aaKnown RBP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 NOMO1Q15155 1222 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 SLC14A2Q15849 920 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 TRIM61Q5EBN2 209 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 NAPEPLDQ6IQ20 393 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 USP45Q70EL2 814 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 ADAT2Q7Z6V5 191 aaKnown RBP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 DEFB119Q8N690 84 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 ECHDC3Q96DC8 303 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 QKIQ96PU8 341 aaKnown RBP eCLIP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 IL12RB2Q99665 862 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 EIF2B4Q9UI10 523 aaKnown RBP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 RPL26L1Q9UNX3 145 aaKnown RBP14.78□□□□□ -0.04
LIMS3-205ENST00000487150 ATP8A1Q9Y2Q0 1164 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 OTOGLQ3ZCN5 2332 aa14.78□□□□□ -0.04
LIMS3-205ENST00000487150 ATXN2Q99700 1313 aaKnown RBP14.77□□□□□ -0.04
LIMS3-205ENST00000487150 A0A0U1RQJ8 604 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 CFAP69A5D8W1 941 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 C10orf142B7Z368 130 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 PRAMEF26H0Y7S4 382 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 KCNK1O00180 336 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 AREL1O15033 823 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 MUSKO15146 869 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 DDX3YO15523 660 aaKnown RBP14.77□□□□□ -0.05
LIMS3-205ENST00000487150 HTRA2O43464 458 aaPredicted RBP14.77□□□□□ -0.05
LIMS3-205ENST00000487150 KIF5CO60282 957 aa14.77□□□□□ -0.05
LIMS3-205ENST00000487150 CPP00450 1065 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms