RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 HAUS4Q9H6D7 363 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 SCUBE2Q9NQ36 999 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 PARVAQ9NVD7 372 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 MYO6Q9UM54 1294 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 AP4E1Q9UPM8 1137 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 MFHAS1Q9Y4C4 1052 aa24.85■■□□□ 1.57
LIME1-206ENST00000487026 LY6G6EA0A0G2JKS1 128 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 FGF10O15520 208 aaPredicted RBP24.84■■□□□ 1.57
LIME1-206ENST00000487026 PIGNO95427 931 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 JUNDP17535 347 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 PFN3P60673 137 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 EIF2B5Q13144 721 aaKnown RBP24.84■■□□□ 1.57
LIME1-206ENST00000487026 ASIC2Q16515 512 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 DCBLD1Q8N8Z6 715 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 CXorf40AQ8TE69 158 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 TRIM7Q9C029 511 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 NRSN2Q9GZP1 204 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 DHX35Q9H5Z1 703 aaKnown RBP24.84■■□□□ 1.57
LIME1-206ENST00000487026 LRRC19Q9H756 370 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 MBNL1Q9NR56 388 aaKnown RBP24.84■■□□□ 1.57
LIME1-206ENST00000487026 UBA2Q9UBT2 640 aaPredicted RBP24.84■■□□□ 1.57
LIME1-206ENST00000487026 U3KQA8 63 aa24.84■■□□□ 1.57
LIME1-206ENST00000487026 A0A087WV48 116 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 H3BM21 787 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 TLX3O43711 291 aaPredicted RBP24.83■■□□□ 1.57
LIME1-206ENST00000487026 DESP17661 470 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 IGFALSP35858 605 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 RTP5Q14D33 572 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 E4F1Q66K89 784 aaPredicted RBP24.83■■□□□ 1.57
LIME1-206ENST00000487026 PLEKHA7Q6IQ23 1121 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 ZNF571Q7Z3V5 609 aaPredicted RBP24.83■■□□□ 1.57
LIME1-206ENST00000487026 DENND6BQ8NEG7 585 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 LMX1AQ8TE12 382 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 NAP1L5Q96NT1 182 aaPredicted RBP24.83■■□□□ 1.57
LIME1-206ENST00000487026 PEBP4Q96S96 227 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 NCAPGQ9BPX3 1015 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 BPIFA3Q9BQP9 254 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 SLC39A8Q9C0K1 460 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 TCEAL2Q9H3H9 227 aaPredicted RBP24.83■■□□□ 1.57
LIME1-206ENST00000487026 DKK3Q9UBP4 350 aa24.83■■□□□ 1.57
LIME1-206ENST00000487026 PNMA8BQ9ULN7 279 aaPredicted RBP24.83■■□□□ 1.57
LIME1-206ENST00000487026 TMEM191CA6NGB0 347 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 SMTNL1A8MU46 457 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 EEF2KO00418 725 aaKnown RBP24.82■■□□□ 1.56
LIME1-206ENST00000487026 AQP9O43315 295 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 OPA1O60313 960 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 TM7SF2O76062 418 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 FTLP02792 175 aaPredicted RBP24.82■■□□□ 1.56
LIME1-206ENST00000487026 PAPOLAP51003 745 aaKnown RBP24.82■■□□□ 1.56
LIME1-206ENST00000487026 KLHL40Q2TBA0 621 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 DEFB133Q30KQ1 61 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 ERMARDQ5T6L9 678 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 RBFAQ8N0V3 343 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 CACTIN-AS1Q8N1I8 211 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 KCTD15Q96SI1 283 aaPredicted RBP24.82■■□□□ 1.56
LIME1-206ENST00000487026 DUSP23Q9BVJ7 150 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 CPEB1Q9BZB8 566 aaKnown RBP24.82■■□□□ 1.56
LIME1-206ENST00000487026 PDFQ9HBH1 243 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 COQ6Q9Y2Z9 468 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 PCDHB1Q9Y5F3 818 aa24.82■■□□□ 1.56
LIME1-206ENST00000487026 ATRXP46100 2492 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 BUB1BO60566 1050 aaPredicted RBP24.81■■□□□ 1.56
LIME1-206ENST00000487026 XPAP23025 273 aaPredicted RBP24.81■■□□□ 1.56
LIME1-206ENST00000487026 ITPKBP27987 946 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 NDST2P52849 883 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 THOP1P52888 689 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 C1orf61Q13536 156 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 FILIP1LQ4L180 1135 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 FAM181AQ8N9Y4 354 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 SNRNP25Q9BV90 132 aaKnown RBP24.81■■□□□ 1.56
LIME1-206ENST00000487026 SUV39H2Q9H5I1 410 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 IGSF10Q6WRI0 2623 aa24.81■■□□□ 1.56
LIME1-206ENST00000487026 DAPK3O43293 454 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 BRINP1O60477 761 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 PRAMEF11O60813 436 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 SKILP12757 684 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 HTR7P34969 479 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 CDKN3Q16667 212 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 TMEM52BQ4KMG9 183 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 PPP1R2P3Q6NXS1 205 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 CAVIN1Q6NZI2 390 aaKnown RBP24.8■■□□□ 1.56
LIME1-206ENST00000487026 TP53I13Q8NBR0 393 aaPredicted RBP24.8■■□□□ 1.56
LIME1-206ENST00000487026 IFI44Q8TCB0 444 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 AIPL1Q9NZN9 384 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 CNOT8Q9UFF9 292 aaKnown RBP24.8■■□□□ 1.56
LIME1-206ENST00000487026 CSNK1G3Q9Y6M4 447 aa24.8■■□□□ 1.56
LIME1-206ENST00000487026 CPED1A4D0V7 1026 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 DDX3XO00571 662 aaKnown RBP eCLIP24.79■■□□□ 1.565e-9■■□□□ 12.7
LIME1-206ENST00000487026 GCATO75600 419 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 PRKCGP05129 697 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 MIPP30301 263 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 EIF4A3P38919 411 aaKnown RBP24.79■■□□□ 1.56
LIME1-206ENST00000487026 RGRP47804 291 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 DUSP3P51452 185 aaPredicted RBP24.79■■□□□ 1.56
LIME1-206ENST00000487026 PTK2BQ14289 1009 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 PPP6R3Q5H9R7 873 aaPredicted RBP24.79■■□□□ 1.56
LIME1-206ENST00000487026 CDCP2Q5VXM1 449 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 ZCCHC8Q6NZY4 707 aaKnown RBP24.79■■□□□ 1.56
LIME1-206ENST00000487026 RFX8Q6ZV50 586 aa24.79■■□□□ 1.56
LIME1-206ENST00000487026 CAMK1DQ8IU85 385 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms