RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 GSC2O15499 205 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 LTA4HP09960 611 aaKnown RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 PTDSS1P48651 473 aaKnown RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 LIMK2P53671 638 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 TAS2R39P59534 338 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 TRMT5Q32P41 509 aaKnown RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ARL13AQ5H913 290 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 UBXN11Q5T124 520 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 UBR7Q8N806 425 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 DIS3LQ8TF46 1054 aaKnown RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 C10orf82Q8WW14 230 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 PBXIP1Q96AQ6 731 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 GATA5Q9BWX5 397 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 VWA7Q9Y334 891 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 PRR23AA6NEV1 266 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SH3BGRLO75368 114 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 STAU1O95793 577 aaKnown RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 KCNK10P57789 538 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SEMG2Q02383 582 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 C3orf58Q8NDZ4 430 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ZNF398Q8TD17 642 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 TMEM174Q8WUU8 243 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 DENND2DQ9H6A0 471 aaPredicted RBP13.35□□□□□ -0.27
HMGN1-216ENST00000486741 CCSER2Q9H7U1 834 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 ZMYM5Q9UJ78 669 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 BTRCQ9Y297 605 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 TAF1LQ8IZX4 1826 aa13.35□□□□□ -0.27
HMGN1-216ENST00000486741 SDK1Q7Z5N4 2213 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 MATN3O15232 486 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 HDAC3O15379 428 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 BIRC5O15392 142 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 GLUD2P49448 558 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 MRPS22P82650 360 aaKnown RBP13.34□□□□□ -0.27
HMGN1-216ENST00000486741 SLC34A1Q06495 639 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 FASTKQ14296 549 aaKnown RBP13.34□□□□□ -0.27
HMGN1-216ENST00000486741 RETSATQ6NUM9 610 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 RINLQ6ZS11 566 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 SETD3Q86TU7 594 aaPredicted RBP13.34□□□□□ -0.27
HMGN1-216ENST00000486741 AUTS2Q8WXX7 1259 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 IGSF9Q9P2J2 1179 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 C9JVG2 144 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 H2AFYO75367 372 aaKnown RBP13.34□□□□□ -0.27
HMGN1-216ENST00000486741 CNTN5O94779 1100 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 PSMG1O95456 288 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 HLA-DQB2P05538 268 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 CHRNGP07510 517 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 CCNCP24863 283 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 KCNQ1P51787 676 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 CACNA2D1P54289 1103 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 GPR158Q5T848 1215 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 RIPOR1Q6ZS17 1223 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 C14orf80Q86SX3 495 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 SPPL2BQ8TCT7 592 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 KCTD13Q8WZ19 329 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 PCDHB8Q9UN66 801 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 TYROBPO43914 113 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 LRPAP1P30533 357 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 PPIDQ08752 370 aaKnown RBP13.34□□□□□ -0.27
HMGN1-216ENST00000486741 CNSTQ6PJW8 725 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 LRRC74BQ6ZQY2 392 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 RTL3Q8N8U3 475 aaKnown RBP13.34□□□□□ -0.27
HMGN1-216ENST00000486741 OR4K2Q8NGD2 314 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 ZIC5Q96T25 663 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 TMLHEQ9NVH6 421 aa13.34□□□□□ -0.27
HMGN1-216ENST00000486741 OR6C75A6NL08 312 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 PEX11AO75192 247 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 USP1O94782 785 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 IL10P22301 178 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 IL4RP24394 825 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 PBLDP30039 288 aaPredicted RBP13.33□□□□□ -0.27
HMGN1-216ENST00000486741 CORO1AP31146 461 aaKnown RBP13.33□□□□□ -0.27
HMGN1-216ENST00000486741 WASHC5Q12768 1159 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 UPP1Q16831 310 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 HERC6Q8IVU3 1022 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 ANKRD31Q8N7Z5 1873 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 MAB21L3Q8N8X9 362 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 IRGQQ8WZA9 623 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 ZNF778Q96MU6 729 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 PPP1R10Q96QC0 940 aaKnown RBP13.33□□□□□ -0.27
HMGN1-216ENST00000486741 ANKRD6Q9Y2G4 727 aa13.33□□□□□ -0.27
HMGN1-216ENST00000486741 CCNT2O60583 730 aaKnown RBP13.33□□□□□ -0.28
HMGN1-216ENST00000486741 ITGALP20701 1170 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 ATP5F1P24539 256 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-216ENST00000486741 NFKBIAP25963 317 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 ST8SIA6P61647 398 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 LIPMQ5VYY2 423 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 DNAJC14Q6Y2X3 702 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-216ENST00000486741 SERINC5Q86VE9 423 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 SPDYE1Q8NFV5 336 aaPredicted RBP13.33□□□□□ -0.28
HMGN1-216ENST00000486741 NTAN1Q96AB6 310 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 ESAMQ96AP7 390 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 CNBD2Q96M20 576 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 CORO1BQ9BR76 489 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 LRMDAQ9H2I8 198 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 CCDC134Q9H6E4 229 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 AGO1Q9UL18 857 aaKnown RBP13.33□□□□□ -0.28
HMGN1-216ENST00000486741 DTNAQ9Y4J8 743 aa13.33□□□□□ -0.28
HMGN1-216ENST00000486741 SLCO1B7G3V0H7 640 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms