RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 SLC10A2Q12908 348 aaPredicted RBP13.1□□□□□ -0.31
SSR4-211ENST00000486204 CARD16Q5EG05 197 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 ZFYVE27Q5T4F4 411 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 ATXN7L2Q5T6C5 722 aaPredicted RBP13.1□□□□□ -0.31
SSR4-211ENST00000486204 SLC36A4Q6YBV0 504 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 SPOCD1Q6ZMY3 1216 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 USP30Q70CQ3 517 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 OR2AP1Q8NGE2 309 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 ALG3Q92685 438 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 TOE1Q96GM8 510 aaKnown RBP13.1□□□□□ -0.31
SSR4-211ENST00000486204 PRORYQ9H606 182 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 SP110Q9HB58 689 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 PCDHA3Q9Y5H8 950 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 APC2O95996 2303 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 ACACAQ13085 2346 aa13.1□□□□□ -0.31
SSR4-211ENST00000486204 KALRNO60229 2985 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 SCN8AQ9UQD0 1980 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 hCG_1818297A0A087WSY0 165 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 IL1BP01584 269 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 ACADMP11310 421 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 CD6P30203 668 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 ACSL1P33121 698 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 GARSP41250 739 aaKnown RBP13.09□□□□□ -0.31
SSR4-211ENST00000486204 RGRP47804 291 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 NAP1L1P55209 391 aaKnown RBP13.09□□□□□ -0.31
SSR4-211ENST00000486204 RHOAP61586 193 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 ADCY2Q08462 1091 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 SLC10A7Q0GE19 358 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 IFI16Q16666 785 aaKnown RBP13.09□□□□□ -0.31
SSR4-211ENST00000486204 TTC31Q49AM3 519 aaPredicted RBP13.09□□□□□ -0.31
SSR4-211ENST00000486204 DSG4Q86SJ6 1040 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 SLC41A1Q8IVJ1 513 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 ATPAF2Q8N5M1 289 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 RNF10Q8N5U6 811 aaKnown RBP13.09□□□□□ -0.31
SSR4-211ENST00000486204 TMIEQ8NEW7 156 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 OR6K2Q8NGY2 324 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 EXD1Q8NHP7 514 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 GRIN3AQ8TCU5 1115 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 ARRDC3Q96B67 414 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 EXOC2Q96KP1 924 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 CCDC114Q96M63 670 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 HERPUD2Q9BSE4 406 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 TSGA10Q9BZW7 698 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 FBXL12Q9NXK8 326 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 DTLQ9NZJ0 730 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 IL36AQ9UHA7 158 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 PCOLCE2Q9UKZ9 415 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 FZD4Q9ULV1 537 aa13.09□□□□□ -0.31
SSR4-211ENST00000486204 TENM4Q6N022 2769 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 CCDC66A2RUB6 948 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 C1QTNF3-AMACRE9PGA6 284 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 PLK4O00444 970 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 APOL1O14791 398 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 MUSKO15146 869 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 DDX3YO15523 660 aaKnown RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 KRT86O43790 486 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 LEFTY1O75610 366 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 IGSF6O95976 241 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 PRNPP04156 253 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 KRT10P13645 584 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 ITPKBP27987 946 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 OXTRP30559 389 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 GKP32189 559 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 RECQLP46063 649 aaPredicted RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 DNA2P51530 1060 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 SNRPD1P62314 119 aaKnown RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 RFTN1Q14699 578 aaPredicted RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 PPP2R5EQ16537 467 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 TMCO4Q5TGY1 634 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 AGBL4Q5VU57 503 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 NPNTQ6UXI9 565 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 FAM124AQ86V42 546 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 GALNT15Q8N3T1 639 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 TSEN2Q8NCE0 465 aaKnown RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 SETD7Q8WTS6 366 aaKnown RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 FATE1Q969F0 183 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 HDAC11Q96DB2 347 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 RBM41Q96IZ5 413 aaKnown RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 NSMCE3Q96MG7 304 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 GDAP1L1Q96MZ0 367 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 ZNF599Q96NL3 588 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 OLFM3Q96PB7 478 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 TSGA13Q96PP4 275 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 HEPHQ9BQS7 1158 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 NEUROG2Q9H2A3 272 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 ZDHHC6Q9H6R6 413 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 HECAQ9UBI9 543 aaPredicted RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 GUCA1BQ9UMX6 200 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
SSR4-211ENST00000486204 PPP2R2CQ9Y2T4 447 aa13.08□□□□□ -0.32
SSR4-211ENST00000486204 MYLKQ15746 1914 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 CAPN8A6NHC0 703 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 INSIG1O15503 277 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 NRDCO43847 1150 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 ZRANB2O95218 330 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSR4-211ENST00000486204 FTCDO95954 541 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 PECAM1P16284 738 aaPredicted RBP13.07□□□□□ -0.32
SSR4-211ENST00000486204 ADPRHP54922 357 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 TAS2R38P59533 333 aa13.07□□□□□ -0.32
SSR4-211ENST00000486204 CNTN1Q12860 1018 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms