RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 EEF2KO00418 725 aaKnown RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 PLK4O00444 970 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 AREL1O15033 823 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 TNFSF14O43557 240 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 BNIP3LO60238 219 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 TMCC1O94876 653 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 C1SP09871 688 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 H2AFZP0C0S5 128 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 HNRNPA2B1P22626 353 aaKnown RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 IL1R2P27930 398 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 ARRB1P49407 418 aaPredicted RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 NUMBP49757 651 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 PAPOLAP51003 745 aaKnown RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 DNA2P51530 1060 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 RENBPP51606 427 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 FAM193AP78312 1265 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 IL10RBQ08334 325 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 DPYSQ14117 519 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 SHBQ15464 509 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 SLC18A3Q16572 532 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 CA9Q16790 459 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 INAVAQ3KP66 663 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 TDRD12Q587J7 1177 aaKnown RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 CCDC122Q5T0U0 273 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 GDPD4Q6W3E5 623 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 H2AFVQ71UI9 128 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 KANSL1Q7Z3B3 1105 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 ABI3BPQ7Z7G0 1075 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 SPATS2Q86XZ4 545 aaKnown RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 DNAAF5Q86Y56 855 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 ARHGAP12Q8IWW6 846 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 CACTIN-AS1Q8N1I8 211 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 RHBDD1Q8TEB9 315 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 CPLX3Q8WVH0 158 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 HMCESQ96FZ2 354 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 KLHDC7BQ96G42 594 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 GDAP1L1Q96MZ0 367 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 TUBGCP5Q96RT8 1024 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 PEBP4Q96S96 227 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 KCTD15Q96SI1 283 aaPredicted RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 TRIM7Q9C029 511 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 SLC39A8Q9C0K1 460 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 THAP2Q9H0W7 228 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 TSPY26PQ9H489 355 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 DHX35Q9H5Z1 703 aaKnown RBP7.1□□□□□ -1.27
VPS50-218ENST00000485994 ZWILCHQ9H900 591 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 AASDHPPTQ9NRN7 309 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 KLHL11Q9NVR0 708 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 UVRAGQ9P2Y5 699 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 LHX3Q9UBR4 397 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 PCSK1NQ9UHG2 260 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 PCDHGA1Q9Y5H4 931 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 ACTL7AQ9Y615 435 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 ADGRG1Q9Y653 693 aa7.1□□□□□ -1.27
VPS50-218ENST00000485994 ANKRD36A6QL64 1941 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 A0A1W2PQ67 120 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 TSPAN11A1L157 253 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 TMEM8BA6NDV4 472 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 J3KR12 359 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 KRIT1O00522 736 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 KCNK3O14649 394 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 DAPK3O43293 454 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 PCDH8O95206 1070 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 IGSF6O95976 241 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 RARAP10276 462 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 TIMP2P16035 220 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 IL4RP24394 825 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 AKT2P31751 481 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 HSPA9P38646 679 aaKnown RBP7.09□□□□□ -1.27
VPS50-218ENST00000485994 EIF4A3P38919 411 aaKnown RBP7.09□□□□□ -1.27
VPS50-218ENST00000485994 ARL4AP40617 200 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 ARHGAP25P42331 645 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 ARSEP51690 589 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 RHOAP61586 193 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 ELP6Q0PNE2 266 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 SGCGQ13326 291 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 PDK2Q15119 407 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 TCEAL1Q15170 157 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 HADHQ16836 314 aaKnown RBP7.09□□□□□ -1.27
VPS50-218ENST00000485994 TMEM52BQ4KMG9 183 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 RALGPS1Q5JS13 557 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 BRAT1Q6PJG6 821 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 SARM1Q6SZW1 724 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 PARS2Q7L3T8 475 aaKnown RBP7.09□□□□□ -1.27
VPS50-218ENST00000485994 TTC7BQ86TV6 843 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 SLCO6A1Q86UG4 719 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 VSIG1Q86XK7 387 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 VSTM4Q8IW00 320 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 CYP4X1Q8N118 509 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 KDF1Q8NAX2 398 aaPredicted RBP7.09□□□□□ -1.27
VPS50-218ENST00000485994 DENND6BQ8NEG7 585 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 SETD7Q8WTS6 366 aaKnown RBP7.09□□□□□ -1.27
VPS50-218ENST00000485994 TSC1Q92574 1164 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 FATE1Q969F0 183 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 CENPTQ96BT3 561 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 ECHDC3Q96DC8 303 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 BMFQ96LC9 184 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 KLHL32Q96NJ5 620 aa7.09□□□□□ -1.27
VPS50-218ENST00000485994 CNTNAP3BQ96NU0 1288 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms