RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 BRD8Q9H0E9 1235 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 MIR1-1HGQ9H1L0 117 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 SMOC1Q9H4F8 434 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 HAUS2Q9NVX0 235 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 EFR3BQ9Y2G0 817 aa11.98□□□□□ -0.49
HPS4-214ENST00000485842 GOLGA6L9A6NEM1 432 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 USP27XA6NNY8 438 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 METTL12A8MUP2 240 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 KCNK3O14649 394 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 TJP3O95049 919 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 PCDH8O95206 1070 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 MAT2AP31153 395 aaKnown RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 ABL2P42684 1182 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 TAS2R38P59533 333 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 IFI35P80217 286 aaPredicted RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 DSC2Q02487 901 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 NSUN2Q08J23 767 aaKnown RBP eCLIP11.97□□□□□ -0.49
HPS4-214ENST00000485842 SPEM2Q0P670 501 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 PRKD1Q15139 912 aaPredicted RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 NOMO1Q15155 1222 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 WDR45BQ5MNZ6 344 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 SYCP2LQ5T4T6 812 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 ALYREFQ86V81 257 aaKnown RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 TEX26Q8N6G2 289 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 PDCD6IPQ8WUM4 868 aaKnown RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 FATE1Q969F0 183 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 BIRC7Q96CA5 298 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 NSMCE3Q96MG7 304 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 QKIQ96PU8 341 aaKnown RBP eCLIP11.97□□□□□ -0.49
HPS4-214ENST00000485842 SEMA3CQ99985 751 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 TLR10Q9BXR5 811 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 PCED1AQ9H1Q7 454 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 SUV39H2Q9H5I1 410 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 NOD2Q9HC29 1040 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 EIF2B4Q9UI10 523 aaKnown RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 ITM2BQ9Y287 266 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 PCDHGA5Q9Y5G8 931 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 ZFHX2Q9C0A1 2572 aaPredicted RBP11.97□□□□□ -0.49
HPS4-214ENST00000485842 OTOGLQ3ZCN5 2332 aa11.97□□□□□ -0.49
HPS4-214ENST00000485842 GON4LQ3T8J9 2241 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 PLXNA2O75051 1894 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.96□□□□□ -0.49
HPS4-214ENST00000485842 UPK3BL1B0FP48 263 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 UPK3BL2E5RIL1 263 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 NEMP1O14524 444 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 RNGTTO60942 597 aaKnown RBP11.96□□□□□ -0.49
HPS4-214ENST00000485842 PRKCGP05129 697 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 CFIP05156 583 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 IGHV4-34P06331 123 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 CR2P20023 1033 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 EIF3EP60228 445 aaKnown RBP11.96□□□□□ -0.49
HPS4-214ENST00000485842 TRAF2Q12933 501 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 SLC45A4Q5BKX6 768 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 ZNF569Q5MCW4 686 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 TTC7BQ86TV6 843 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 ZSWIM9Q86XI8 627 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 SYT12Q8IV01 421 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 CDKL3Q8IVW4 592 aaPredicted RBP11.96□□□□□ -0.49
HPS4-214ENST00000485842 SLC35F6Q8N357 371 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 ZCCHC9Q8N567 271 aaKnown RBP11.96□□□□□ -0.49
HPS4-214ENST00000485842 KLK6Q92876 244 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 ZNF641Q96N77 438 aaPredicted RBP11.96□□□□□ -0.49
HPS4-214ENST00000485842 IL12RB2Q99665 862 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 C10orf88Q9H8K7 445 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 PREBQ9HCU5 417 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 PARD6AQ9NPB6 346 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 TMEM74BQ9NUR3 256 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 DKK3Q9UBP4 350 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 AMACRQ9UHK6 382 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 GGT7Q9UJ14 662 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 PCDHGC4Q9Y5F7 938 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 FADS3Q9Y5Q0 445 aa11.96□□□□□ -0.49
HPS4-214ENST00000485842 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.96□□□□□ -0.49
HPS4-214ENST00000485842 VPS13AQ96RL7 3174 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 A0A1W2PQU0 124 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 TCRBV7S2A1N4TA0A589 114 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 TSPAN11A1L157 253 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 HACD1B0YJ81 288 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 PATE3B3GLJ2 98 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 ENC1O14682 589 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 KIF5CO60282 957 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 SOCS5O75159 536 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 CPP00450 1065 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 RBP3P10745 1247 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 TIMP2P16035 220 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 ITIH2P19823 946 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 PTPN3P26045 913 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 DPP6P42658 865 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 CCR5P51681 352 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 SEMG2Q02383 582 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 NIPAL4Q0D2K0 466 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 XRCC4Q13426 336 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 SF3A2Q15428 464 aaKnown RBP11.95□□□□□ -0.5
HPS4-214ENST00000485842 RALGPS1Q5JS13 557 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 SEL1L3Q68CR1 1132 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 ALG1LQ6GMV1 187 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 TCEAL6Q6IPX3 200 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 BRAT1Q6PJG6 821 aa11.95□□□□□ -0.5
HPS4-214ENST00000485842 ADAT2Q7Z6V5 191 aaKnown RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms