RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 JUNDP17535 347 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 HTR7P34969 479 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 VPS36Q86VN1 386 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 CENPTQ96BT3 561 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 C1QTNF7Q9BXJ2 289 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 PARVAQ9NVD7 372 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 DONSONQ9NYP3 566 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 LHX3Q9UBR4 397 aa26.01■■□□□ 1.75
HLA-F-227ENST00000485513 UBA2Q9UBT2 640 aaPredicted RBP26.01■■□□□ 1.75
HLA-F-227ENST00000485513 LY6G6EA0A0G2JKS1 128 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 TMCO5BA8MYB1 307 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 AQP9O43315 295 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 TLX3O43711 291 aaPredicted RBP26■■□□□ 1.75
HLA-F-227ENST00000485513 OPA1O60313 960 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 TM7SF2O76062 418 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 GP1BAP07359 652 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 TIMP2P16035 220 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 IGFALSP35858 605 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 ABCG1P45844 678 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 THOP1P52888 689 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 EIF2B5Q13144 721 aaKnown RBP26■■□□□ 1.75
HLA-F-227ENST00000485513 MAMLD1Q13495 774 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 CYTH1Q15438 398 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 EXOC2Q96KP1 924 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 NCAPGQ9BPX3 1015 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 CPEB1Q9BZB8 566 aaKnown RBP26■■□□□ 1.75
HLA-F-227ENST00000485513 RTN4Q9NQC3 1192 aaKnown RBP26■■□□□ 1.75
HLA-F-227ENST00000485513 GPATCH2LQ9NWQ4 482 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 AP4E1Q9UPM8 1137 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 U3KQA8 63 aa26■■□□□ 1.75
HLA-F-227ENST00000485513 INSIG1O15503 277 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 ITIH2P19823 946 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 XPAP23025 273 aaPredicted RBP25.99■■□□□ 1.75
HLA-F-227ENST00000485513 PSMA2P25787 234 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 PTK2BQ14289 1009 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 ANO6Q4KMQ2 910 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 ZCCHC8Q6NZY4 707 aaKnown RBP25.99■■□□□ 1.75
HLA-F-227ENST00000485513 LMX1AQ8TE12 382 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 BTN2A2Q8WVV5 523 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 WRAP53Q9BUR4 548 aaKnown RBP25.99■■□□□ 1.75
HLA-F-227ENST00000485513 LRRC19Q9H756 370 aa25.99■■□□□ 1.75
HLA-F-227ENST00000485513 LRRC53A6NM62 1247 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 ATMINO43313 823 aaPredicted RBP25.98■■□□□ 1.75
HLA-F-227ENST00000485513 BRINP1O60477 761 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 EIF2S3P41091 472 aaKnown RBP25.98■■□□□ 1.75
HLA-F-227ENST00000485513 SUOXP51687 545 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 NDST2P52849 883 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 YPEL5P62699 121 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 COL9A2Q14055 689 aaPredicted RBP25.98■■□□□ 1.75
HLA-F-227ENST00000485513 CDCP2Q5VXM1 449 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 PLEKHA7Q6IQ23 1121 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 LRRC69Q6ZNQ3 347 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 DNAAF5Q86Y56 855 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 ABCG4Q9H172 646 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 DHX35Q9H5Z1 703 aaKnown RBP25.98■■□□□ 1.75
HLA-F-227ENST00000485513 PDFQ9HBH1 243 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 NCKIPSDQ9NZQ3 722 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 TMEM63CQ9P1W3 806 aa25.98■■□□□ 1.75
HLA-F-227ENST00000485513 PIGNO95427 931 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 ELP6Q0PNE2 266 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 GRM3Q14832 879 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 ASIC2Q16515 512 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 KLHL40Q2TBA0 621 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 DEFB133Q30KQ1 61 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 SOWAHCQ53LP3 525 aaPredicted RBP25.97■■□□□ 1.75
HLA-F-227ENST00000485513 SNIP1Q8TAD8 396 aaKnown RBP25.97■■□□□ 1.75
HLA-F-227ENST00000485513 IFI44Q8TCB0 444 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 HCAR2Q8TDS4 363 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 CRELD1Q96HD1 420 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 CELF6Q96J87 481 aaKnown RBP25.97■■□□□ 1.75
HLA-F-227ENST00000485513 DEPDC7Q96QD5 511 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 IL12RB2Q99665 862 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 BPIFA3Q9BQP9 254 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 SPASTQ9UBP0 616 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 APOBEC3BQ9UH17 382 aaKnown RBP25.97■■□□□ 1.75
HLA-F-227ENST00000485513 PCDHB1Q9Y5F3 818 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 LOC400499M0QZD8 3231 aa25.97■■□□□ 1.75
HLA-F-227ENST00000485513 ASXL3Q9C0F0 2248 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 SMTNL1A8MU46 457 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 EIF3CLB5ME19 914 aaKnown RBP25.96■■□□□ 1.75
HLA-F-227ENST00000485513 J3KR12 359 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 EEF2KO00418 725 aaKnown RBP25.96■■□□□ 1.75
HLA-F-227ENST00000485513 TOR1BO14657 336 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 TPP1O14773 563 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 RRP8O43159 456 aaKnown RBP25.96■■□□□ 1.75
HLA-F-227ENST00000485513 PRAMEF11O60813 436 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 CA9Q16790 459 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 TMEM52BQ4KMG9 183 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 FILIP1LQ4L180 1135 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 ERMARDQ5T6L9 678 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 RBFAQ8N0V3 343 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 TP53I13Q8NBR0 393 aaPredicted RBP25.96■■□□□ 1.75
HLA-F-227ENST00000485513 FGF11Q92914 225 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 EIF3CQ99613 913 aaKnown RBP25.96■■□□□ 1.75
HLA-F-227ENST00000485513 SUV39H2Q9H5I1 410 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 MBNL1Q9NR56 388 aaKnown RBP25.96■■□□□ 1.75
HLA-F-227ENST00000485513 PCSK1NQ9UHG2 260 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 SALL4Q9UJQ4 1053 aa25.96■■□□□ 1.75
HLA-F-227ENST00000485513 ARHGAP42A6NI28 874 aa25.95■■□□□ 1.74
HLA-F-227ENST00000485513 RIOK3O14730 519 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms