RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 THOP1P52888 689 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 RHOAP61586 193 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 RAD51Q06609 339 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 ISXQ2M1V0 245 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 C3orf20Q8ND61 904 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 ZNF248Q8NDW4 579 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 CXorf40AQ8TE69 158 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 HIC2Q96JB3 615 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 IL12RB2Q99665 862 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 SEPT11Q9NVA2 429 aaKnown RBP19.48■□□□□ 0.71
COL27A1-205ENST00000485397 SPASTQ9UBP0 616 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 APOBEC3BQ9UH17 382 aaKnown RBP19.48■□□□□ 0.71
COL27A1-205ENST00000485397 DAAM1Q9Y4D1 1078 aa19.48■□□□□ 0.71
COL27A1-205ENST00000485397 TCRBV5S1A1TA0A578 114 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 EME2A4GXA9 379 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 RASA4BC9J798 803 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 TPP1O14773 563 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 CASC3O15234 703 aaKnown RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 RASA4O43374 803 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 CREB3O43889 395 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 IGSF6O95976 241 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 ADKP55263 362 aaKnown RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 PCBP4P57723 403 aaKnown RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 CXADRP78310 365 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 PTK2BQ14289 1009 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 CYTH1Q15438 398 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 INO80DQ53TQ3 878 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 PRRT3Q5FWE3 981 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 EFHC2Q5JST6 749 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 PERM1Q5SV97 790 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 MON1BQ7L1V2 547 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 GPR155Q7Z3F1 870 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 PHACTR4Q8IZ21 702 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 LSMEM2Q8N112 164 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 TP53I13Q8NBR0 393 aaPredicted RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 NEK11Q8NG66 645 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 BTN2A2Q8WVV5 523 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 EXOC2Q96KP1 924 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 EPAS1Q99814 870 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 WRAP53Q9BUR4 548 aaKnown RBP19.47■□□□□ 0.71
COL27A1-205ENST00000485397 LRRC61Q9BV99 259 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 POLR1BQ9H9Y6 1135 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 LHX3Q9UBR4 397 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 FZD10Q9ULW2 581 aa19.47■□□□□ 0.71
COL27A1-205ENST00000485397 A0A1W2PNU3 283 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-205ENST00000485397 MUSKO15146 869 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 C1QL1O75973 258 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 DXOO77932 396 aaKnown RBP19.46■□□□□ 0.71
COL27A1-205ENST00000485397 EIF4A3P38919 411 aaKnown RBP19.46■□□□□ 0.71
COL27A1-205ENST00000485397 ZNF143P52747 638 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-205ENST00000485397 YBEYP58557 167 aaPredicted RBP19.46■□□□□ 0.71
COL27A1-205ENST00000485397 RPL7AP62424 266 aaKnown RBP19.46■□□□□ 0.71
COL27A1-205ENST00000485397 NR0B2Q15466 257 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 KLHL40Q2TBA0 621 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 DNAJC24Q6P3W2 148 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 SLC35F3Q8IY50 421 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 CASKIN2Q8WXE0 1202 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 MCEEQ96PE7 176 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 AGPAT1Q99943 283 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 BOCQ9BWV1 1114 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 CLPBQ9H078 707 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 NCKIPSDQ9NZQ3 722 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 DKK3Q9UBP4 350 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 COQ6Q9Y2Z9 468 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 MFHAS1Q9Y4C4 1052 aa19.46■□□□□ 0.71
COL27A1-205ENST00000485397 WASH4PA8MWX3 477 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 LZTS3O60299 673 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-205ENST00000485397 PIGNO95427 931 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 CELA2BP08218 269 aaPredicted RBP19.45■□□□□ 0.7
COL27A1-205ENST00000485397 TSHRP16473 764 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 YPEL5P62699 121 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 C1QBPQ07021 282 aaKnown RBP19.45■□□□□ 0.7
COL27A1-205ENST00000485397 SERINC3Q13530 473 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 C3orf38Q5JPI3 329 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 FAXCQ5TGI0 409 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 ATXN7L3BQ96GX2 97 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 C1QTNF7Q9BXJ2 289 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 SLC13A1Q9BZW2 595 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 ASCL3Q9NQ33 180 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 LIMA1Q9UHB6 759 aaKnown RBP19.45■□□□□ 0.7
COL27A1-205ENST00000485397 SATB2Q9UPW6 733 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 ENTPD2Q9Y5L3 495 aa19.45■□□□□ 0.7
COL27A1-205ENST00000485397 TEX51A0A1B0GUA7 166 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 LGALS16A8MUM7 142 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 LMO7DNF2Z398 122 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 TK2O00142 265 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 YY2O15391 372 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 ANXA6P08133 673 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 XPAP23025 273 aaPredicted RBP19.44■□□□□ 0.7
COL27A1-205ENST00000485397 ERVPABLB-1P60509 514 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 UBXN1Q04323 297 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 C19orf57Q0VDD7 668 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 IRF4Q15306 451 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 PARP15Q460N3 678 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 TMEM52BQ4KMG9 183 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 PPP1R15BQ5SWA1 713 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 C6orf132Q5T0Z8 1188 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 MACC1Q6ZN28 852 aa19.44■□□□□ 0.7
COL27A1-205ENST00000485397 RBM43Q6ZSC3 357 aaKnown RBP19.44■□□□□ 0.7
COL27A1-205ENST00000485397 UMODL1-AS1Q8N2C9 162 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms