RNA–Protein interactions for RNA: ENST00000485035.1

SOX2-OT-209, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-209ENST00000485035 AMFRQ9UKV5 643 aa13.73□□□□□ -0.21
SOX2-OT-209ENST00000485035 ZFR2Q9UPR6 939 aaKnown RBP13.73□□□□□ -0.21
SOX2-OT-209ENST00000485035 ITM2BQ9Y287 266 aa13.73□□□□□ -0.21
SOX2-OT-209ENST00000485035 FADS3Q9Y5Q0 445 aa13.73□□□□□ -0.21
SOX2-OT-209ENST00000485035 ABCA7Q8IZY2 2146 aa13.73□□□□□ -0.21
SOX2-OT-209ENST00000485035 A0A1B0GTW7 788 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 TSPAN11A1L157 253 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 KCNK1O00180 336 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 TRAFD1O14545 582 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 WNT9AO14904 365 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 AREL1O15033 823 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 BCAT2O15382 392 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 AP1G1O43747 822 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 FOXD2O60548 495 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 CCNB1P14635 433 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 GNSP15586 552 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 TIMP2P16035 220 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 HSPA9P38646 679 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 RWDD2BP57060 319 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 GRM3Q14832 879 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 TMEM259Q4ZIN3 620 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 FAM182AQ5T1J6 154 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 SEL1L3Q68CR1 1132 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 LAYNQ6UX15 382 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 B4GALNT4Q76KP1 1039 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 CCDC13Q8IYE1 715 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 BBS5Q8N3I7 341 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 PDLIM2Q96JY6 352 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 ZNF641Q96N77 438 aaPredicted RBP13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 SLC6A18Q96N87 628 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 NUDCD1Q96RS6 583 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 HEMGNQ9BXL5 484 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 NUSAP1Q9BXS6 441 aaKnown RBP13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 ATP13A3Q9H7F0 1226 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 NOD2Q9HC29 1040 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 SLC6A14Q9UN76 642 aa13.72□□□□□ -0.21
SOX2-OT-209ENST00000485035 THADAQ6YHU6 1953 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 A0A1W2PQU0 124 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 DDX3YO15523 660 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 NRDCO43847 1150 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 PCDH8O95206 1070 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 HLA-DQB2P05538 268 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 PYGMP11217 842 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ENGP17813 658 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ITIH2P19823 946 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 TGM2P21980 687 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 SERPINA4P29622 427 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 PTPN7P35236 360 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 MAPK8P45983 427 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 NR2C2P49116 596 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 COPS2P61201 443 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 BNC1Q01954 994 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 BCL2L1Q07817 233 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ZBTB17Q13105 803 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 PDK1Q15118 436 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ZNF284Q2VY69 593 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ALG1LQ6GMV1 187 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 AADACL2Q6P093 401 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 NEK5Q6P3R8 708 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ZNF662Q6ZS27 426 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 BBS12Q6ZW61 710 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 TTC7BQ86TV6 843 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 HORMAD1Q86X24 394 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 HCAR2Q8TDS4 363 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 KLK6Q92876 244 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 RAB7BQ96AH8 199 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 HAUS1Q96CS2 278 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 ECHDC3Q96DC8 303 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 EDEM2Q9BV94 578 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 KCNF1Q9H3M0 494 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 SCUBE2Q9NQ36 999 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 LZTFL1Q9NQ48 299 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 RBM22Q9NW64 420 aaKnown RBP eCLIP13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 TPX2Q9ULW0 747 aaKnown RBP13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 PIEZO1Q92508 2521 aa13.71□□□□□ -0.21
SOX2-OT-209ENST00000485035 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 A0A1B0GVT2 93 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 MIF4GDA9UHW6 222 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 UPK3BL1B0FP48 263 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 PRR5-ARHGAP8B1AHC4 643 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 UPK3BL2E5RIL1 263 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 PPP1R12AO14974 1030 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 HTRA2O43464 458 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 PRKCGP05129 697 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 PRLRP16471 622 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 CSNK1EP49674 416 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 AFF3P51826 1226 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 RACK1P63244 317 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 IFI35P80217 286 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 AP1B1Q10567 949 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 GRIK2Q13002 908 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 ZNF211Q13398 564 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 FGL2Q14314 439 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 IHHQ14623 411 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 PRKD1Q15139 912 aaPredicted RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 UGP2Q16851 508 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 BRAT1Q6PJG6 821 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 PRPF39Q86UA1 669 aaKnown RBP13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 HES6Q96HZ4 224 aa13.7□□□□□ -0.22
SOX2-OT-209ENST00000485035 SERAC1Q96JX3 654 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms