RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 ELAVL1Q15717 326 aaKnown RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 SLC18A3Q16572 532 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 SUPT20HL1Q3ZLR7 823 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 ACSM6Q6P461 480 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 DRICH1Q6PGQ1 229 aaPredicted RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 TSSK4Q6SA08 328 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 KIAA1324Q6UXG2 1013 aaKnown RBP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 ADCK1Q86TW2 530 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 FAM217AQ8IXS0 508 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 PEX5LQ8IYB4 626 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 METTL25Q8N6Q8 603 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 IQUBQ8NA54 791 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 FBXO30Q8TB52 745 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 CLEC4CQ8WTT0 213 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 NSMCE1Q8WV22 266 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 PTERQ96BW5 349 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 TCF25Q9BQ70 676 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 MGME1Q9BQP7 344 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 H2AFJQ9BTM1 129 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 NUP85Q9BW27 656 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 GPR87Q9BY21 358 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.61□□□□□ -1.67
PTCD3-214ENST00000483925 SH3BP4Q9P0V3 963 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 HSPB7Q9UBY9 170 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 IL19Q9UHD0 177 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 PADI1Q9ULC6 663 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 AP1M2Q9Y6Q5 423 aa4.61□□□□□ -1.67
PTCD3-214ENST00000483925 A0A1W2PRV1 198 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 UBE2QL1A1L167 161 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 LRRC72A6NJI9 287 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 NPIPB13A6NJU9 1138 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 DRGXA6NNA5 263 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 NPIPB5A8MRT5 1133 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 NPIPB4C9JG80 1138 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 M0QZQ0 153 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ADAMDEC1O15204 470 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TRIAP1O43715 76 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 CEP104O60308 925 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 GCNT3O95395 438 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 HEXBP07686 556 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 SRPRAP08240 638 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ZNF37AP17032 561 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 KCNA5P22460 613 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 AVPR2P30518 371 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 PRPHP41219 470 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 NDUFV1P49821 464 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 CAMPP49913 170 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 STX1BP61266 288 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TUBB4BP68371 445 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 AKAP17AQ02040 695 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 COL10A1Q03692 680 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 KLHL30Q0D2K2 578 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 IKQ13123 557 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 OLIG2Q13516 323 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 GRAPQ13588 217 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 CAPSQ13938 189 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 FAM187BQ17R55 369 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ASTE1Q2TB18 679 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 LETM2Q2VYF4 491 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ANKRD20A4Q4UJ75 823 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ANKRD20A8PQ5CZ79 823 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ZRANB3Q5FWF4 1079 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ZNF667Q5HYK9 610 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ANKRD20A2Q5SQ80 823 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ANKRD20A1Q5TYW2 823 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ANKRD20A3Q5VUR7 823 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 DAB2IPQ5VWQ8 1189 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 KDELC1Q6UW63 502 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 C16orf89Q6UX73 402 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 MRGPREQ86SM8 312 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 HOOK3Q86VS8 718 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 XYLT1Q86Y38 959 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TBC1D21Q8IYX1 336 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 SYCP3Q8IZU3 236 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 CPXM2Q8N436 756 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ATAD1Q8NBU5 361 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ZNF540Q8NDQ6 660 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 SRFBP1Q8NEF9 429 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TSPAN14Q8NG11 270 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 GLMPQ8WWB7 406 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 ZNF606Q8WXB4 792 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 PSPC1Q8WXF1 523 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 SYAP1Q96A49 352 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TRIM44Q96DX7 344 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 MMABQ96EY8 250 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TRMT61AQ96FX7 289 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 MARS2Q96GW9 593 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 RBM18Q96H35 190 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 VPS39Q96JC1 886 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 PAFAH2Q99487 392 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 EGFL8Q99944 293 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 SRSF8Q9BRL6 282 aaKnown RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 SYT17Q9BSW7 474 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 DPCDQ9BVM2 203 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 C1QTNF1Q9BXJ1 281 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 TRIM31Q9BZY9 425 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 HRH4Q9H3N8 390 aa4.6□□□□□ -1.67
PTCD3-214ENST00000483925 DENND2DQ9H6A0 471 aaPredicted RBP4.6□□□□□ -1.67
PTCD3-214ENST00000483925 LIN28AQ9H9Z2 209 aaKnown RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms