RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 GCOM1H8Y6P7 765 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 NDC80O14777 642 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PRPSAP2O60256 369 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 RAD17O75943 681 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 HAUS5O94927 633 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 REC8O95072 547 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CELF2O95319 508 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 HMGCRP04035 888 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ABCB1P08183 1280 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SNRPA1P09661 255 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CYP2C9P11712 490 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 EEF2P13639 858 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 COX7A2P14406 83 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 TFEBP19484 476 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 EPS15P42566 896 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 GPD2P43304 727 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SLC15A1P46059 708 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CCR10P46092 362 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 EIF3BP55884 814 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SLFN5Q08AF3 891 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 GOLGA8DPQ0D2H9 430 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ABHD18Q0P651 414 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 RPA4Q13156 261 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PTK6Q13882 451 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 FRG1Q14331 258 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ACAP1Q15027 740 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 IQCB1Q15051 598 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 LETM2Q2VYF4 491 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ZMAT1Q5H9K5 638 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 TMEM196Q5HYL7 178 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 NHSL2Q5HYW2 709 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 TMEM200BQ69YZ2 307 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 IGFL4Q6B9Z1 124 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 KIAA0930Q6ICG6 404 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CDC73Q6P1J9 531 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ISLR2Q6UXK2 745 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CLEC9AQ6UXN8 241 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SLC30A10Q6XR72 485 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CLEC17AQ6ZS10 378 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PIK3AP1Q6ZUJ8 805 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CLEC14AQ86T13 490 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 KBTBD6Q86V97 674 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 DNAJC10Q8IXB1 793 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PEX5LQ8IYB4 626 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SYCP3Q8IZU3 236 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SPARTQ8N0X7 666 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 FSTL5Q8N475 847 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PLD5Q8N7P1 536 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 C11orf44Q8N8P7 122 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SYT2Q8N9I0 419 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 TMEM116Q8NCL8 245 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PDPRQ8NCN5 879 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ZBTB44Q8NCP5 570 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 MAFAQ8NHW3 353 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CTCFLQ8NI51 663 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 FIBINQ8TAL6 211 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SLC35B2Q8TB61 432 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 DENND1AQ8TEH3 1009 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 POMGNT1Q8WZA1 660 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 MR1Q95460 341 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SMARCE1Q969G3 411 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ARRDC3Q96B67 414 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 HIST1H2AAQ96QV6 131 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CD180Q99467 661 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PLA2G12BQ9BX93 195 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 HEMGNQ9BXL5 484 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 KCNH6Q9H252 994 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 VPS33BQ9H267 617 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 SCPEP1Q9HB40 452 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 GBA2Q9HCG7 927 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PFDN4Q9NQP4 134 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 TMLHEQ9NVH6 421 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 MARCH4Q9P2E8 410 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CGNQ9P2M7 1197 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 NCDNQ9UBB6 729 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 FETUBQ9UGM5 382 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 VPS51Q9UID3 782 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 HACL1Q9UJ83 578 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 NFU1Q9UMS0 254 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 NENFQ9UMX5 172 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 DUSP12Q9UNI6 340 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 PPIEQ9UNP9 301 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 DRG1Q9Y295 367 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 ZBTB1Q9Y2K1 713 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 RBM8AQ9Y5S9 174 aaKnown RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 EPN1Q9Y6I3 576 aaPredicted RBP3.39□□□□□ -1.87
ZNF561-216ENST00000483768 AP1M2Q9Y6Q5 423 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 CAPN7Q9Y6W3 813 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 LAMA3Q16787 3333 aa3.39□□□□□ -1.87
ZNF561-216ENST00000483768 RAB3GAP2Q9H2M9 1393 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 UNC80Q8N2C7 3258 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 TRBC2A0A5B9 178 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 C2orf78A6NCI8 922 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 H0YIN7 160 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ZNF263O14978 683 aa3.38□□□□□ -1.87
ZNF561-216ENST00000483768 WDR46O15213 610 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 CD3EAPO15446 510 aaKnown RBP3.38□□□□□ -1.87
ZNF561-216ENST00000483768 ASAP2O43150 1006 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms