RNA–Protein interactions for RNA: ENST00000483376.1

COL2A1-206, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 5

Gene COL2A1, Length 641 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-206ENST00000483376 GKP32189 559 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 LMNB2Q03252 620 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 POM121L1PQ3SYA9 428 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 KIAA1161Q6NSJ0 714 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 RGL4Q8IZJ4 473 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 PGBD5Q8N414 524 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 DEFB119Q8N690 84 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 ASB12Q8WXK4 309 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 KLHL32Q96NJ5 620 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 IL12RB2Q99665 862 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 OSBPL8Q9BZF1 889 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 POLR1EQ9GZS1 481 aaKnown RBP16.45■□□□□ 0.22
COL2A1-206ENST00000483376 GUCA1BQ9UMX6 200 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 SLC6A14Q9UN76 642 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 PPP2R2CQ9Y2T4 447 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 HEY1Q9Y5J3 304 aa16.45■□□□□ 0.22
COL2A1-206ENST00000483376 DMXL1Q9Y485 3027 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3DA0A087WVF3 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3IA0A087WXS9 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3EA0A087X179 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3KA0A087X1G2 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3FA6NER0 549 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3LB9A6J9 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 PLK4O00444 970 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 KHNYNO15037 678 aaKnown RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 BCAT2O15382 392 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 HTRA2O43464 458 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 RNGTTO60942 597 aaKnown RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 ZNF189O75820 626 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 FSBPO95073 299 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3HP0C7X1 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 LIMK1P53667 647 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 ARHGAP8P85298 464 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 BCL2L1Q07817 233 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 ADCY2Q08462 1091 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 XRCC4Q13426 336 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 PRKD1Q15139 912 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TMEM259Q4ZIN3 620 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3GQ6DHY5 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3CQ6IPX1 549 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 HORMAD1Q86X24 394 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 CCDC50Q8IVM0 306 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 TBC1D3Q8IZP1 549 aaPredicted RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 P3H4Q92791 437 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 LGMNQ99538 433 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 ZDHHC5Q9C0B5 715 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 EIF2B4Q9UI10 523 aaKnown RBP16.44■□□□□ 0.22
COL2A1-206ENST00000483376 ATP8A1Q9Y2Q0 1164 aa16.44■□□□□ 0.22
COL2A1-206ENST00000483376 CFAP69A5D8W1 941 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 FAM47DPA6NHR8 397 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 HACD1B0YJ81 288 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 SPINT1O43278 529 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 MTSS1O43312 755 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 MAP3K6O95382 1288 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 PIGNO95427 931 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 FTCDO95954 541 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 TIMP2P16035 220 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 ABL2P42684 1182 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 GRIA4P48058 902 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 SCNN1BP51168 640 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 AFF3P51826 1226 aaKnown RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 PPP2CBP62714 309 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 RPS21P63220 83 aaKnown RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 RACK1P63244 317 aaKnown RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 PPP2CAP67775 309 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 ELP6Q0PNE2 266 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 UGP2Q16851 508 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 SETMARQ53H47 684 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 TRIM61Q5EBN2 209 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 NPNTQ6UXI9 565 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 PRPF39Q86UA1 669 aaKnown RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 C12orf50Q8NA57 414 aaPredicted RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 CCNYQ8ND76 341 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 TRIM58Q8NG06 486 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 ALS2CR12Q96Q35 445 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 NUSAP1Q9BXS6 441 aaKnown RBP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 NOD2Q9HC29 1040 aa16.43■□□□□ 0.22
COL2A1-206ENST00000483376 RBM22Q9NW64 420 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL2A1-206ENST00000483376 LNP1A1A4G5 178 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 UPK3BL1B0FP48 263 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 UPK3BL2E5RIL1 263 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 TJP3O95049 919 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 PYGMP11217 842 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 PECAM1P16284 738 aaPredicted RBP16.42■□□□□ 0.22
COL2A1-206ENST00000483376 POLR2LP62875 67 aaKnown RBP16.42■□□□□ 0.22
COL2A1-206ENST00000483376 DYNLT1P63172 113 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 OVGP1Q12889 678 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 NOMO1Q15155 1222 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 SLC14A2Q15849 920 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 ZNF284Q2VY69 593 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 KAZNQ674X7 775 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 NAPEPLDQ6IQ20 393 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 TTC7BQ86TV6 843 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 IQCHQ86VS3 1027 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 CAMK1DQ8IU85 385 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 TFB1MQ8WVM0 346 aaKnown RBP16.42■□□□□ 0.22
COL2A1-206ENST00000483376 FEM1CQ96JP0 617 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 NSMCE3Q96MG7 304 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 KCNF1Q9H3M0 494 aa16.42■□□□□ 0.22
COL2A1-206ENST00000483376 EBF2Q9HAK2 575 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms