RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 GOLGA6L22H0YM25 854 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 MYO1FO00160 1098 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 SLC7A4O43246 635 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 SLC37A4O43826 429 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 RAMP2O60895 175 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 GOSR1O95249 250 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 PDGFBP01127 241 aaPredicted RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 SLC4A1P02730 911 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 WEE2P0C1S8 567 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 CYP3A7P24462 503 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 KLRC2P26717 231 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 AVPR2P30518 371 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 HNF4AP41235 474 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 SLC11A1P49279 550 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 SCNN1GP51170 649 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 CCR5P51681 352 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 MAP2K6P52564 334 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 EVCP57679 992 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 ATP2C1P98194 919 aaPredicted RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 IRF9Q00978 393 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 COL10A1Q03692 680 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 UBXN1Q04323 297 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 TOB2Q14106 344 aaPredicted RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 FGL2Q14314 439 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 EMC2Q15006 297 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 ACAP1Q15027 740 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 SMAD1Q15797 465 aaKnown RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 CNGA2Q16280 664 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 SETMARQ53H47 684 aaPredicted RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 KRTCAP3Q53RY4 240 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 CT83Q5H943 113 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 NCAPH2Q6IBW4 605 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 LIN54Q6MZP7 749 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 Q6ZRM9 215 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 RAPH1Q70E73 1250 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 ANO5Q75V66 913 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 NLRP14Q86W24 1093 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 CCAR2Q8N163 923 aaKnown RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 CNNM3Q8NE01 707 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 CEP70Q8NHQ1 597 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 FAM71BQ8TC56 605 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 TCP11Q8WWU5 503 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 RSAD2Q8WXG1 361 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 ST8SIA4Q92187 359 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 DLG3Q92796 817 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 ZNF274Q96GC6 653 aaPredicted RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 FAM20AQ96MK3 541 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 MBOAT7Q96N66 472 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 LXNQ9BS40 222 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 TMEM175Q9BSA9 504 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 PCIF1Q9H4Z3 704 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 TRMT1Q9NXH9 659 aaKnown RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 USP36Q9P275 1121 aaKnown RBP6.86□□□□□ -1.31
CLK1-212ENST00000482590 DNAJB4Q9UDY4 337 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 ARHGAP26Q9UNA1 814 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 PCDHGB5Q9Y5G0 923 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 B3GALT1Q9Y5Z6 326 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 TCHHQ07283 1943 aa6.86□□□□□ -1.31
CLK1-212ENST00000482590 RIF1Q5UIP0 2472 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 STK36Q9NRP7 1315 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 PLOD2O00469 737 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 EDIL3O43854 480 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 CCNT1O60563 726 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 PPFIA2O75334 1257 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 STBD1O95210 358 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 BAG4O95429 457 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 GALTP07902 379 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 ATP5F1P24539 256 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 APEX1P27695 318 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 SDHAP31040 664 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 YWHABP31946 246 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 NPEPPSP55786 919 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 MUM1Q2TAK8 710 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 MMEL1Q495T6 779 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 ODF2Q5BJF6 829 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 XKR9Q5GH70 373 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 ESRP1Q6NXG1 681 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 PIK3AP1Q6ZUJ8 805 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 OTUD6AQ7L8S5 288 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 DNAJB7Q7Z6W7 309 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 PRPF39Q86UA1 669 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 CXorf67Q86X51 503 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 HACE1Q8IYU2 909 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 OR8H3Q8N146 312 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 C12orf76Q8N812 135 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 RNF149Q8NC42 400 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 STON2Q8WXE9 905 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 WASF1Q92558 559 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 TMEM143Q96AN5 459 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 TRIM44Q96DX7 344 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 ZNF845Q96IR2 970 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 RAX2Q96IS3 184 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 TTPALQ9BTX7 342 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 HERC2P3Q9BVR0 1158 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 TRIM6Q9C030 488 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 DHX33Q9H6R0 707 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 SAYSD1Q9NPB0 183 aa6.85□□□□□ -1.31
CLK1-212ENST00000482590 CCDC177Q9NQR7 707 aaPredicted RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 MRPL17Q9NRX2 175 aaKnown RBP6.85□□□□□ -1.31
CLK1-212ENST00000482590 DPP7Q9UHL4 492 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms