RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 FYNP06241 537 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 KRT13P13646 458 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ARSAP15289 507 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 APEX1P27695 318 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 TKTP29401 623 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 ACAA2P42765 397 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 CORO7P57737 925 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 MEF2AQ02078 507 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 GHRHRQ02643 423 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 COX10Q12887 443 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CLCA4Q14CN2 919 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 SLC25A24Q6NUK1 477 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 USP30Q70CQ3 517 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TRABD2AQ86V40 505 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 KRT73Q86Y46 540 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 XXYLT1Q8NBI6 393 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZNF480Q8WV37 535 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 DTNBP1Q96EV8 351 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 C12orf42Q96LP6 360 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TACO1Q9BSH4 297 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 ANP32EQ9BTT0 268 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CXorf36Q9H7Y0 433 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZBTB26Q9HCK0 441 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 USP40Q9NVE5 1235 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 KCND2Q9NZV8 630 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 HPCAL4Q9UM19 191 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PLEKHM1Q9Y4G2 1056 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZBED9Q6R2W3 1325 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 C5orf51A6NDU8 294 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TEX22C9J3V5 150 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PES1O00541 588 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 CLIC2O15247 247 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 SCAF4O95104 1147 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 PRAMEF12O95522 483 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PRNPP04156 253 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PCCAP05165 728 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 CCDC175P0C221 793 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TMEM11P17152 192 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PRKCAP17252 672 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 HLA-DPA1P20036 260 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TRHRP34981 398 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 CDK7P50613 346 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 MVDP53602 400 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ATXN3P54252 364 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 TPD52P55327 224 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 UBE2HP62256 183 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 POU6F2P78424 691 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 KCNJ10P78508 379 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 SLC39A14Q15043 492 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 PABPC1LQ4VXU2 614 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 C10orf76Q5T2E6 689 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZNF648Q5T619 568 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 CYP4A22Q5TCH4 519 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 GRHL2Q6ISB3 625 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 SLC51AQ86UW1 340 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 DHX40Q8IX18 779 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 MRPL43Q8N983 215 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 SLC5A11Q8WWX8 675 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TRMT61AQ96FX7 289 aaKnown RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 C16orf45Q96MC5 204 aaPredicted RBP3.43□□□□□ -1.86
SMC6-208ENST00000481708 SPXQ9BT56 116 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 WDR11Q9BZH6 1224 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TTYH3Q9C0H2 523 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 ZSCAN32Q9NX65 697 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 CDC42EP3Q9UKI2 254 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 TRIM17Q9Y577 477 aa3.43□□□□□ -1.86
SMC6-208ENST00000481708 MYO1GB0I1T2 1018 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 MSTNO14793 375 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 ADAM23O75077 832 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 VPS4BO75351 444 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TULP3O75386 442 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RECQL5O94762 991 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 DDNO94850 711 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 TYMPP19971 482 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 KELP23276 732 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SLC6A2P23975 617 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 HOXD10P28358 340 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 PBX1P40424 430 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 LUMP51884 338 aaPredicted RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 CDH15P55291 814 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RPL7AP62424 266 aaKnown RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 ZNF273Q14593 569 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SMU1Q2TAY7 513 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CEP55Q53EZ4 464 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TMEM198Q66K66 360 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TPGS2Q68CL5 300 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CCDC73Q6ZRK6 1079 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 IGDCC3Q8IVU1 814 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 DPP10Q8N608 796 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 FAM133AQ8N9E0 248 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TMEM171Q8WVE6 324 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 MAK16Q9BXY0 300 aaKnown RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 SERINC1Q9NRX5 453 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 TUBE1Q9UJT0 475 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 RAB21Q9UL25 225 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 SESN1Q9Y6P5 492 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CCP110O43303 1012 aa3.42□□□□□ -1.86
SMC6-208ENST00000481708 CTIFO43310 598 aaKnown RBP3.42□□□□□ -1.86
SMC6-208ENST00000481708 RTN2O75298 545 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms