RNA–Protein interactions for RNA: ENST00000480658.5

CCM2-213, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,136 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-213ENST00000480658 RFFLQ8WZ73 363 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 TSC1Q92574 1164 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 KLHL32Q96NJ5 620 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 FUCA2Q9BTY2 467 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.59□□□□□ -0.55
CCM2-213ENST00000480658 CINPQ9BW66 212 aaPredicted RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 DNAJC28Q9NX36 388 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 IP6K2Q9UHH9 426 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 ZFR2Q9UPR6 939 aaKnown RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 TP53BP1Q12888 1972 aaPredicted RBP11.59□□□□□ -0.55
CCM2-213ENST00000480658 TMEM131Q92545 1883 aa11.59□□□□□ -0.55
CCM2-213ENST00000480658 CHD5Q8TDI0 1954 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 FAM170AA1A519 330 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 TSPAN11A1L157 253 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 GOLGA8CPA6NN73 597 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 TPP1O14773 563 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 WNT9AO14904 365 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 SCAMP1O15126 338 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 LRCH4O75427 683 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 TOP3BO95985 862 aaKnown RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 PAK4O96013 591 aaPredicted RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 CKMT1AP12532 417 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 JUPP14923 745 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 DGKAP23743 735 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 MIPP30301 263 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 AGERQ15109 404 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 HADHQ16836 314 aaKnown RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 SEL1L3Q68CR1 1132 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 TMCO3Q6UWJ1 677 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 KANSL1Q7Z3B3 1105 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 PYROXD2Q8N2H3 581 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 OR13H1Q8NG92 308 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 OR6K2Q8NGY2 324 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 TPCN2Q8NHX9 752 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 SCG3Q8WXD2 468 aaKnown RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 SPOCK2Q92563 424 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 SNRNP25Q9BV90 132 aaKnown RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 SLC13A1Q9BZW2 595 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 NRSN2Q9GZP1 204 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 SUV39H2Q9H5I1 410 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 NOL6Q9H6R4 1146 aaKnown RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 PDFQ9HBH1 243 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 ZNHIT6Q9NWK9 470 aaKnown RBP11.58□□□□□ -0.56
CCM2-213ENST00000480658 SPASTQ9UBP0 616 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 SEPT3Q9UH03 358 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 CAPN11Q9UMQ6 739 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 ASPMQ8IZT6 3477 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 GON4LQ3T8J9 2241 aa11.58□□□□□ -0.56
CCM2-213ENST00000480658 IGLON5A6NGN9 336 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 SRRM3A6NNA2 597 aaPredicted RBP11.57□□□□□ -0.56
CCM2-213ENST00000480658 MYO1FO00160 1098 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 DDX3XO00571 662 aaKnown RBP eCLIP11.57□□□□□ -0.56
CCM2-213ENST00000480658 SOCS5O75159 536 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 KELP23276 732 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 CDH6P55285 790 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 PFN3P60673 137 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 BCL2L1Q07817 233 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 PEX6Q13608 980 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 PDE1CQ14123 709 aaPredicted RBP11.57□□□□□ -0.56
CCM2-213ENST00000480658 ZNF235Q14590 738 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 UGP2Q16851 508 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 PROX2Q3B8N5 592 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 TMEM52BQ4KMG9 183 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 RAB6CQ53S08 254 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 DHRS13Q6UX07 377 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 MACC1Q6ZN28 852 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 MAP7D3Q8IWC1 876 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 NDUFAF2Q8N183 169 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 SLC22A18ASQ8N1D0 253 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 FSTL5Q8N475 847 aaPredicted RBP11.57□□□□□ -0.56
CCM2-213ENST00000480658 NAP1L5Q96NT1 182 aaPredicted RBP11.57□□□□□ -0.56
CCM2-213ENST00000480658 PSKH2Q96QS6 385 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 IL12RB2Q99665 862 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 MYOCQ99972 504 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 RAB6CQ9H0N0 254 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 CBX8Q9HC52 389 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 FZD3Q9NPG1 666 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 SCUBE2Q9NQ36 999 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 TAS2R14Q9NYV8 317 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 UVRAGQ9P2Y5 699 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 MYO1AQ9UBC5 1043 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 PCSK1NQ9UHG2 260 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 SALL4Q9UJQ4 1053 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 CLCA2Q9UQC9 943 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 TPRP12270 2363 aaKnown RBP11.57□□□□□ -0.56
CCM2-213ENST00000480658 PCNX2A6NKB5 2137 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 NUMA1Q14980 2115 aa11.57□□□□□ -0.56
CCM2-213ENST00000480658 USP24Q9UPU5 2620 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 DFFAO00273 331 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 PDE2AO00408 941 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 ATMINO43313 823 aaPredicted RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 AQP9O43315 295 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 SIGLEC6O43699 453 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ALPIP09923 528 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ERCC2P18074 760 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 CA4P22748 312 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 ABL2P42684 1182 aa11.56□□□□□ -0.56
CCM2-213ENST00000480658 PAPOLAP51003 745 aaKnown RBP11.56□□□□□ -0.56
CCM2-213ENST00000480658 OGDHQ02218 1023 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms