RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 POP4O95707 220 aaKnown RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 SRFP11831 508 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 GKP32189 559 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 RECQLP46063 649 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 CCNHP51946 323 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 RAD51Q06609 339 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 BCL2L1Q07817 233 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 TRAF2Q12933 501 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 ZNF234Q14588 700 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 SLC1A5Q15758 541 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 KYNUQ16719 465 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 CCDC38Q502W7 563 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 IER5LQ5T953 404 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 EMC10Q5UCC4 262 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 DPY19L3Q6ZPD9 716 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 CAMK1DQ8IU85 385 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 IGDCC3Q8IVU1 814 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 ZNF366Q8N895 744 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 FBXO36Q8NEA4 188 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 OR2A12Q8NGT7 310 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 PYROXD1Q8WU10 500 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 UBLCP1Q8WVY7 318 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 PTPRN2Q92932 1015 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 LRRC39Q96DD0 335 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 TRIB3Q96RU7 358 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 WDR83Q9BRX9 315 aaKnown RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 TDRD1Q9BXT4 1180 aaKnown RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 SLC2A4RGQ9NR83 387 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 NINJ2Q9NZG7 142 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 BFARQ9NZS9 450 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 THAP10Q9P2Z0 257 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 PRKAG3Q9UGI9 489 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 HCN2Q9UL51 889 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 CHMP2BQ9UQN3 213 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 STARD13Q9Y3M8 1113 aa17.75■□□□□ 0.43
UPF3A-206ENST00000480362 ARIH1Q9Y4X5 557 aaPredicted RBP17.75■□□□□ 0.43
UPF3A-206ENST00000480362 K7EQS6 105 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 PIGNO95427 931 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 NDST3O95803 873 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 PRLP01236 227 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 ATXN1LP0C7T5 689 aaKnown RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 GLULP15104 373 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 HSD17B3P37058 310 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 CASP8Q14790 479 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 PON2Q15165 354 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 UAP1Q16222 522 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 SIRPB2Q5JXA9 342 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 CERCAMQ5T4B2 595 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 EGFLAMQ63HQ2 1017 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 DENND2CQ68D51 928 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 HDXQ7Z353 690 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 PALM2Q8IXS6 379 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 CHST14Q8NCH0 376 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 PDCD6IPQ8WUM4 868 aaKnown RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 EZH1Q92800 747 aaPredicted RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 EBNA1BP2Q99848 306 aaKnown RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 CPEB1Q9BZB8 566 aaKnown RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 TMEM245Q9H330 911 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 PABPC3Q9H361 631 aaKnown RBP17.74■□□□□ 0.43
UPF3A-206ENST00000480362 ATP13A3Q9H7F0 1226 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 ZDHHC4Q9NPG8 344 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 SYBUQ9NX95 663 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 THEGQ9P2T0 379 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 MAD1L1Q9Y6D9 718 aa17.74■□□□□ 0.43
UPF3A-206ENST00000480362 MYO10Q9HD67 2058 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 WASH3PC4AMC7 463 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 TTC4O95801 387 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 CPP00450 1065 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 PDHA1P08559 390 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 HLA-EP13747 358 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 HNRNPLP14866 589 aaKnown RBP eCLIP17.73■□□□□ 0.43
UPF3A-206ENST00000480362 HLA-DPA1P20036 260 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 CA4P22748 312 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 IL12RB1P42701 662 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 CRADDP78560 199 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 ZP2Q05996 745 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 GALNT3Q14435 633 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 SLC44A4Q53GD3 710 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 TMEM196Q5HYL7 178 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 SPDYCQ5MJ68 293 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 UBAP2Q5T6F2 1119 aaKnown RBP17.73■□□□□ 0.43
UPF3A-206ENST00000480362 FSTL4Q6MZW2 842 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 CASC4Q6P4E1 433 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 SERPINA13PQ6UXR4 307 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 VOPP1Q96AW1 172 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 STAMBPL1Q96FJ0 436 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 TUBGCP5Q96RT8 1024 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 ACOX2Q99424 681 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 HEPHQ9BQS7 1158 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 FUT8Q9BYC5 575 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 IL22Q9GZX6 179 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 EPB41L4BQ9H329 900 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 ZDHHC6Q9H6R6 413 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 ZNF446Q9NWS9 450 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 PCDHB9Q9Y5E1 797 aa17.73■□□□□ 0.43
UPF3A-206ENST00000480362 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.73■□□□□ 0.43
UPF3A-206ENST00000480362 EDDM13A0A1B0GTR0 161 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 TRAFD1O14545 582 aaPredicted RBP17.72■□□□□ 0.43
UPF3A-206ENST00000480362 RIPK2O43353 540 aa17.72■□□□□ 0.43
UPF3A-206ENST00000480362 FZD6O60353 706 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms